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    RRT6 Rrt6p [ Saccharomyces cerevisiae S288C ]

    Gene ID: 852731, updated on 18-Sep-2024

    Summary

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    Official Symbol
    RRT6
    Official Full Name
    Rrt6p
    Primary source
    SGD:S000003114
    Locus tag
    YGL146C
    See related
    AllianceGenome:SGD:S000003114; FungiDB:YGL146C; VEuPathDB:YGL146C
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Saccharomyces cerevisiae S288C (strain: S288C)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
    Summary
    Predicted to be located in membrane. Predicted to be integral component of membrane. [provided by Alliance of Genome Resources, Apr 2022]
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    Genomic context

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    See RRT6 in Genome Data Viewer
    Location:
    chromosome: VII
    Exon count:
    1
    Sequence:
    Chromosome: VII; NC_001139.9 (228751..229686, complement)

    Chromosome VII - NC_001139.9Genomic Context describing neighboring genes Neighboring gene bifunctional chorismate synthase/riboflavin reductase [NAD(P)H] ARO2 Neighboring gene ribosomal 60S subunit protein L9A Neighboring gene Tip20p Neighboring gene putative lipase ROG1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_001139.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Basic functional analysis of six unknown open reading frames from Saccharomyces cerevisiae: four from chromosome VII and two from chromosome XV. Pearson BM, et al. Yeast, 2002 Jan 30. PMID 11788967
    2. The sequence of a nearly unclonable 22.8 kb segment on the left arm chromosome VII from Saccharomyces cerevisiae reveals ARO2, RPL9A, TIP1, MRF1 genes and six new open reading frames. Voet M, et al. Yeast, 1997 Feb. PMID 9046099
    3. Isoform-selective oligomer formation of Saccharomyces cerevisiae p24 family proteins. Hirata R, et al. J Biol Chem, 2013 Dec 27. PMID 24217251, Free PMC Article
    4. Genetic identification of factors that modulate ribosomal DNA transcription in Saccharomyces cerevisiae. Hontz RD, et al. Genetics, 2009 May. PMID 19270272, Free PMC Article
    5. The nucleotide sequence of Saccharomyces cerevisiae chromosome VII. Tettelin H, et al. Nature, 1997 May 29. PMID 9169869

    See all (17) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by SGD

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in membrane NAS
    Non-traceable Author Statement
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    Rrt6p
    NP_011369.1
    • Integral membrane protein, member of the p24 family; forms complex with Erp3p, Erp5p, and Emp24p; non-essential gene identified in a screen for mutants with increased levels of rDNA transcription

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001139.9 Reference assembly

      Range
      228751..229686 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001181011.1 → NP_011369.1  TPA: Rrt6p [Saccharomyces cerevisiae S288C]

      See identical proteins and their annotated locations for NP_011369.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      D6VU03, P53117
      UniProtKB/TrEMBL
      A6ZU37, B3LHK1, B5VII4, C7GPQ7, C8Z8A4, N1P9M9
      Conserved Domains (1) summary
      pfam01105
      Location:144 → 300
      EMP24_GP25L; emp24/gp25L/p24 family/GOLD
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P53117.1

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