U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    PPARA peroxisome proliferator activated receptor alpha [ Homo sapiens (human) ]

    Gene ID: 5465, updated on 28-Oct-2024

    Summary

    Official Symbol
    PPARAprovided by HGNC
    Official Full Name
    peroxisome proliferator activated receptor alphaprovided by HGNC
    Primary source
    HGNC:HGNC:9232
    See related
    Ensembl:ENSG00000186951 MIM:170998; AllianceGenome:HGNC:9232
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    PPAR; NR1C1; hPPAR; PPARalpha; PPAR-alpha
    Summary
    Peroxisome proliferators include hypolipidemic drugs, herbicides, leukotriene antagonists, and plasticizers; this term arises because they induce an increase in the size and number of peroxisomes. Peroxisomes are subcellular organelles found in plants and animals that contain enzymes for respiration and for cholesterol and lipid metabolism. The action of peroxisome proliferators is thought to be mediated via specific receptors, called PPARs, which belong to the steroid hormone receptor superfamily. PPARs affect the expression of target genes involved in cell proliferation, cell differentiation and in immune and inflammation responses. Three closely related subtypes (alpha, beta/delta, and gamma) have been identified. This gene encodes the subtype PPAR-alpha, which is a nuclear transcription factor. Multiple alternatively spliced transcript variants have been described for this gene, although the full-length nature of only two has been determined. [provided by RefSeq, Jul 2008]
    Expression
    Ubiquitous expression in kidney (RPKM 12.0), heart (RPKM 8.1) and 24 other tissues See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See PPARA in Genome Data Viewer
    Location:
    22q13.31
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 22 NC_000022.11 (46150526..46243756)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 22 NC_060946.1 (46635225..46728457)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 22 NC_000022.10 (46546429..46639653)

    Chromosome 22 - NC_000022.11Genomic Context describing neighboring genes Neighboring gene collagen alpha-1(III) chain-like Neighboring gene MIRLET7B host gene Neighboring gene microRNA let-7b Neighboring gene uncharacterized LOC124905137 Neighboring gene uncharacterized LOC124905138 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:46533901-46534402 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 13903 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 13904 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 19232 Neighboring gene uncharacterized LOC105373074 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:46591783-46592283 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr22:46596710-46597314 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr22:46597315-46597919 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:46610267-46610768 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 13905 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr22:46645973-46646480 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 19233 Neighboring gene cysteine rich DPF motif domain containing 1 Neighboring gene polycystin family receptor for egg jelly

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Phenotypes

    EBI GWAS Catalog

    Description
    Discovery and refinement of loci associated with lipid levels.
    EBI GWAS Catalog
    Genetic Loci Associated with Circulating Levels of Very Long-Chain Saturated Fatty Acids.
    EBI GWAS Catalog

    HIV-1 interactions

    Protein interactions

    Protein Gene Interaction Pubs
    Tat tat PPARalpha and PPARgamma over-expression prevent Tat-induced binding activity and transactivation of nuclear factor-kappaB PubMed
    tat Over-expression of PPARalpha or PPARgamma attenuates Tat-induced up-regulation of inflammatory mediators, such as interleukin (IL)-1beta, tumor necrosis factor-alpha, CCL2, and E-selectin PubMed

    Go to the HIV-1, Human Interaction Database

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Clone Names

    • MGC2237, MGC2452

    Gene Ontology Provided by GOA

    Function Evidence Code Pubs
    enables DNA binding TAS
    Traceable Author Statement
    more info
    PubMed 
    enables DNA-binding transcription activator activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables DNA-binding transcription activator activity, RNA polymerase II-specific IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables DNA-binding transcription factor activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables DNA-binding transcription factor activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables DNA-binding transcription factor activity, RNA polymerase II-specific ISA
    Inferred from Sequence Alignment
    more info
     
    enables DNA-binding transcription repressor activity, RNA polymerase II-specific IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables DNA-binding transcription repressor activity, RNA polymerase II-specific IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables MDM2/MDM4 family protein binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables NFAT protein binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables RNA polymerase II-specific DNA-binding transcription factor binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables lipid binding IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables mitogen-activated protein kinase kinase kinase binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables nuclear receptor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables nuclear receptor activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables nuclear steroid receptor activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables phosphatase binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables protein domain specific binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables protein-containing complex binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables sequence-specific DNA binding ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables transcription coactivator binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables ubiquitin conjugating enzyme binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in behavioral response to nicotine IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in cell differentiation IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in cellular response to fructose stimulus IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in cellular response to starvation ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in circadian regulation of gene expression ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in enamel mineralization IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in epidermis development IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in fatty acid metabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in gluconeogenesis IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in heart development IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in hormone-mediated signaling pathway IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in intracellular receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in lipoprotein metabolic process IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in negative regulation of appetite ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in negative regulation of blood pressure IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in negative regulation of cell growth involved in cardiac muscle cell development IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in negative regulation of cholesterol storage IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in negative regulation of cholesterol storage IDA
    Inferred from Direct Assay
    more info
    PubMed 
    acts_upstream_of negative regulation of cytokine production involved in inflammatory response IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in negative regulation of glycolytic process IDA
    Inferred from Direct Assay
    more info
    PubMed 
    acts_upstream_of negative regulation of hepatocyte apoptotic process IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in negative regulation of inflammatory response IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in negative regulation of inflammatory response IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in negative regulation of leukocyte cell-cell adhesion IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in negative regulation of macrophage derived foam cell differentiation IC
    Inferred by Curator
    more info
    PubMed 
    involved_in negative regulation of macrophage derived foam cell differentiation IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in negative regulation of miRNA transcription IDA
    Inferred from Direct Assay
    more info
    PubMed 
    acts_upstream_of_or_within negative regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of negative regulation of reactive oxygen species biosynthetic process IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in negative regulation of sequestering of triglyceride IDA
    Inferred from Direct Assay
    more info
    PubMed 
    acts_upstream_of negative regulation of signaling receptor activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in negative regulation of transcription by RNA polymerase II IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in negative regulation of transcription by RNA polymerase II IDA
    Inferred from Direct Assay
    more info
    PubMed 
    acts_upstream_of_or_within negative regulation of transforming growth factor beta receptor signaling pathway IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in nitric oxide metabolic process IEA
    Inferred from Electronic Annotation
    more info
     
    acts_upstream_of positive regulation of ATP biosynthetic process IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in positive regulation of DNA-templated transcription IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in positive regulation of fatty acid beta-oxidation TAS
    Traceable Author Statement
    more info
    PubMed 
    involved_in positive regulation of fatty acid metabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in positive regulation of fatty acid oxidation ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in positive regulation of gluconeogenesis IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in positive regulation of lipid biosynthetic process IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in positive regulation of transcription by RNA polymerase II IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in positive regulation of transcription by RNA polymerase II IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in positive regulation of transcription by RNA polymerase II ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    acts_upstream_of_or_within positive regulation of transformation of host cell by virus IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in regulation of cellular ketone metabolic process IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in regulation of circadian rhythm ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in regulation of fatty acid metabolic process IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in regulation of fatty acid transport TAS
    Traceable Author Statement
    more info
    PubMed 
    involved_in response to ethanol IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in response to hypoxia IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in response to insulin IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in response to nutrient IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in steroid hormone receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in wound healing IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in chromatin ISA
    Inferred from Sequence Alignment
    more info
     
    located_in nucleoplasm IDA
    Inferred from Direct Assay
    more info
     
    located_in nucleoplasm TAS
    Traceable Author Statement
    more info
     
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in nucleus TAS
    Traceable Author Statement
    more info
    PubMed 

    General protein information

    Preferred Names
    peroxisome proliferator-activated receptor alpha
    Names
    nuclear receptor subfamily 1 group C member 1
    peroxisome proliferative activated receptor, alpha

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_012204.2 RefSeqGene

      Range
      4993..98222
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001001928.4NP_001001928.1  peroxisome proliferator-activated receptor alpha isoform 1

      See identical proteins and their annotated locations for NP_001001928.1

      Status: REVIEWED

      Source sequence(s)
      AL078611, FP325332
      Consensus CDS
      CCDS33669.1
      UniProtKB/Swiss-Prot
      B0G0X3, Q07869, Q16241, Q6I9S0, Q92486, Q92689, Q9Y3N1
      UniProtKB/TrEMBL
      F1D8S4
      Conserved Domains (2) summary
      cd06932
      Location:201467
      NR_LBD_PPAR; The ligand binding domain of peroxisome proliferator-activated receptors
      cd06965
      Location:101184
      NR_DBD_Ppar; DNA-binding domain of peroxisome proliferator-activated receptors (PPAR) is composed of two C4-type zinc fingers
    2. NM_001001929.3NP_001001929.1  peroxisome proliferator-activated receptor alpha isoform 1

      Status: REVIEWED

      Source sequence(s)
      AL078611, FP325332
      Consensus CDS
      CCDS33669.1
      UniProtKB/Swiss-Prot
      B0G0X3, Q07869, Q16241, Q6I9S0, Q92486, Q92689, Q9Y3N1
      UniProtKB/TrEMBL
      F1D8S4
      Conserved Domains (2) summary
      cd06932
      Location:201467
      NR_LBD_PPAR; The ligand binding domain of peroxisome proliferator-activated receptors
      cd06965
      Location:101184
      NR_DBD_Ppar; DNA-binding domain of peroxisome proliferator-activated receptors (PPAR) is composed of two C4-type zinc fingers
    3. NM_001362872.2NP_001349801.1  peroxisome proliferator-activated receptor alpha isoform 1

      Status: REVIEWED

      Source sequence(s)
      AL078611, FP325332
      Consensus CDS
      CCDS33669.1
      UniProtKB/Swiss-Prot
      B0G0X3, Q07869, Q16241, Q6I9S0, Q92486, Q92689, Q9Y3N1
      UniProtKB/TrEMBL
      F1D8S4
      Related
      ENSP00000385246.1, ENST00000402126.2
      Conserved Domains (2) summary
      cd06932
      Location:201467
      NR_LBD_PPAR; The ligand binding domain of peroxisome proliferator-activated receptors
      cd06965
      Location:101184
      NR_DBD_Ppar; DNA-binding domain of peroxisome proliferator-activated receptors (PPAR) is composed of two C4-type zinc fingers
    4. NM_001362873.3NP_001349802.1  peroxisome proliferator-activated receptor alpha isoform 1

      Status: REVIEWED

      Source sequence(s)
      AL078611, FP325332
      Consensus CDS
      CCDS33669.1
      UniProtKB/Swiss-Prot
      B0G0X3, Q07869, Q16241, Q6I9S0, Q92486, Q92689, Q9Y3N1
      UniProtKB/TrEMBL
      F1D8S4
      Conserved Domains (2) summary
      cd06932
      Location:201467
      NR_LBD_PPAR; The ligand binding domain of peroxisome proliferator-activated receptors
      cd06965
      Location:101184
      NR_DBD_Ppar; DNA-binding domain of peroxisome proliferator-activated receptors (PPAR) is composed of two C4-type zinc fingers
    5. NM_001393941.1NP_001380870.1  peroxisome proliferator-activated receptor alpha isoform 1

      Status: REVIEWED

      Source sequence(s)
      AL078611, FP325332
      Consensus CDS
      CCDS33669.1
      UniProtKB/Swiss-Prot
      B0G0X3, Q07869, Q16241, Q6I9S0, Q92486, Q92689, Q9Y3N1
      UniProtKB/TrEMBL
      F1D8S4
      Conserved Domains (2) summary
      cd06932
      Location:201467
      NR_LBD_PPAR; The ligand binding domain of peroxisome proliferator-activated receptors
      cd06965
      Location:101184
      NR_DBD_Ppar; DNA-binding domain of peroxisome proliferator-activated receptors (PPAR) is composed of two C4-type zinc fingers
    6. NM_001393942.1NP_001380871.1  peroxisome proliferator-activated receptor alpha isoform 1

      Status: REVIEWED

      Source sequence(s)
      AL078611, FP325332
      Consensus CDS
      CCDS33669.1
      UniProtKB/Swiss-Prot
      B0G0X3, Q07869, Q16241, Q6I9S0, Q92486, Q92689, Q9Y3N1
      UniProtKB/TrEMBL
      F1D8S4
      Conserved Domains (2) summary
      cd06932
      Location:201467
      NR_LBD_PPAR; The ligand binding domain of peroxisome proliferator-activated receptors
      cd06965
      Location:101184
      NR_DBD_Ppar; DNA-binding domain of peroxisome proliferator-activated receptors (PPAR) is composed of two C4-type zinc fingers
    7. NM_001393943.1NP_001380872.1  peroxisome proliferator-activated receptor alpha isoform 1

      Status: REVIEWED

      Source sequence(s)
      AL078611, FP325332
      Consensus CDS
      CCDS33669.1
      UniProtKB/Swiss-Prot
      B0G0X3, Q07869, Q16241, Q6I9S0, Q92486, Q92689, Q9Y3N1
      UniProtKB/TrEMBL
      F1D8S4
      Conserved Domains (2) summary
      cd06932
      Location:201467
      NR_LBD_PPAR; The ligand binding domain of peroxisome proliferator-activated receptors
      cd06965
      Location:101184
      NR_DBD_Ppar; DNA-binding domain of peroxisome proliferator-activated receptors (PPAR) is composed of two C4-type zinc fingers
    8. NM_001393944.1NP_001380873.1  peroxisome proliferator-activated receptor alpha isoform 1

      Status: REVIEWED

      Source sequence(s)
      AL078611, FP325332
      Consensus CDS
      CCDS33669.1
      UniProtKB/Swiss-Prot
      B0G0X3, Q07869, Q16241, Q6I9S0, Q92486, Q92689, Q9Y3N1
      UniProtKB/TrEMBL
      F1D8S4
      Conserved Domains (2) summary
      cd06932
      Location:201467
      NR_LBD_PPAR; The ligand binding domain of peroxisome proliferator-activated receptors
      cd06965
      Location:101184
      NR_DBD_Ppar; DNA-binding domain of peroxisome proliferator-activated receptors (PPAR) is composed of two C4-type zinc fingers
    9. NM_001393945.1NP_001380874.1  peroxisome proliferator-activated receptor alpha isoform 1

      Status: REVIEWED

      Source sequence(s)
      AL078611, FP325332
      Consensus CDS
      CCDS33669.1
      UniProtKB/Swiss-Prot
      B0G0X3, Q07869, Q16241, Q6I9S0, Q92486, Q92689, Q9Y3N1
      UniProtKB/TrEMBL
      F1D8S4
      Conserved Domains (2) summary
      cd06932
      Location:201467
      NR_LBD_PPAR; The ligand binding domain of peroxisome proliferator-activated receptors
      cd06965
      Location:101184
      NR_DBD_Ppar; DNA-binding domain of peroxisome proliferator-activated receptors (PPAR) is composed of two C4-type zinc fingers
    10. NM_001393946.1NP_001380875.1  peroxisome proliferator-activated receptor alpha isoform 2

      Status: REVIEWED

      Source sequence(s)
      AL078611, FP325332
      Conserved Domains (2) summary
      cd06932
      Location:201462
      NR_LBD_PPAR; The ligand binding domain of peroxisome proliferator-activated receptors
      cd06965
      Location:101184
      NR_DBD_Ppar; DNA-binding domain of peroxisome proliferator-activated receptors (PPAR) is composed of two C4-type zinc fingers
    11. NM_001393947.1NP_001380876.1  peroxisome proliferator-activated receptor alpha isoform 3

      Status: REVIEWED

      Source sequence(s)
      AL078611, FP325332
      Conserved Domains (2) summary
      cl02596
      Location:101169
      NR_DBD_like; DNA-binding domain of nuclear receptors is composed of two C4-type zinc fingers
      cl11397
      Location:170250
      NR_LBD; The ligand binding domain of nuclear receptors, a family of ligand-activated transcription regulators
    12. NM_005036.6NP_005027.2  peroxisome proliferator-activated receptor alpha isoform 1

      See identical proteins and their annotated locations for NP_005027.2

      Status: REVIEWED

      Source sequence(s)
      AL078611, FP325332
      Consensus CDS
      CCDS33669.1
      UniProtKB/Swiss-Prot
      B0G0X3, Q07869, Q16241, Q6I9S0, Q92486, Q92689, Q9Y3N1
      UniProtKB/TrEMBL
      F1D8S4
      Related
      ENSP00000385523.1, ENST00000407236.6
      Conserved Domains (2) summary
      cd06932
      Location:201467
      NR_LBD_PPAR; The ligand binding domain of peroxisome proliferator-activated receptors
      cd06965
      Location:101184
      NR_DBD_Ppar; DNA-binding domain of peroxisome proliferator-activated receptors (PPAR) is composed of two C4-type zinc fingers

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000022.11 Reference GRCh38.p14 Primary Assembly

      Range
      46150526..46243756
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_047441420.1XP_047297376.1  peroxisome proliferator-activated receptor alpha isoform X1

      UniProtKB/Swiss-Prot
      B0G0X3, Q07869, Q16241, Q6I9S0, Q92486, Q92689, Q9Y3N1
      UniProtKB/TrEMBL
      F1D8S4
    2. XM_047441421.1XP_047297377.1  peroxisome proliferator-activated receptor alpha isoform X1

      UniProtKB/Swiss-Prot
      B0G0X3, Q07869, Q16241, Q6I9S0, Q92486, Q92689, Q9Y3N1
      UniProtKB/TrEMBL
      F1D8S4
    3. XM_047441423.1XP_047297379.1  peroxisome proliferator-activated receptor alpha isoform X1

      UniProtKB/Swiss-Prot
      B0G0X3, Q07869, Q16241, Q6I9S0, Q92486, Q92689, Q9Y3N1
      UniProtKB/TrEMBL
      F1D8S4
    4. XM_047441424.1XP_047297380.1  peroxisome proliferator-activated receptor alpha isoform X1

      UniProtKB/Swiss-Prot
      B0G0X3, Q07869, Q16241, Q6I9S0, Q92486, Q92689, Q9Y3N1
      UniProtKB/TrEMBL
      F1D8S4
    5. XM_047441422.1XP_047297378.1  peroxisome proliferator-activated receptor alpha isoform X1

      UniProtKB/Swiss-Prot
      B0G0X3, Q07869, Q16241, Q6I9S0, Q92486, Q92689, Q9Y3N1
      UniProtKB/TrEMBL
      F1D8S4
    6. XM_011530240.3XP_011528542.1  peroxisome proliferator-activated receptor alpha isoform X1

      See identical proteins and their annotated locations for XP_011528542.1

      UniProtKB/Swiss-Prot
      B0G0X3, Q07869, Q16241, Q6I9S0, Q92486, Q92689, Q9Y3N1
      UniProtKB/TrEMBL
      F1D8S4
      Conserved Domains (2) summary
      cd06932
      Location:201467
      NR_LBD_PPAR; The ligand binding domain of peroxisome proliferator-activated receptors
      cd06965
      Location:101184
      NR_DBD_Ppar; DNA-binding domain of peroxisome proliferator-activated receptors (PPAR) is composed of two C4-type zinc fingers
    7. XM_011530239.3XP_011528541.1  peroxisome proliferator-activated receptor alpha isoform X1

      See identical proteins and their annotated locations for XP_011528541.1

      UniProtKB/Swiss-Prot
      B0G0X3, Q07869, Q16241, Q6I9S0, Q92486, Q92689, Q9Y3N1
      UniProtKB/TrEMBL
      F1D8S4
      Conserved Domains (2) summary
      cd06932
      Location:201467
      NR_LBD_PPAR; The ligand binding domain of peroxisome proliferator-activated receptors
      cd06965
      Location:101184
      NR_DBD_Ppar; DNA-binding domain of peroxisome proliferator-activated receptors (PPAR) is composed of two C4-type zinc fingers
    8. XM_047441428.1XP_047297384.1  peroxisome proliferator-activated receptor alpha isoform X4

    9. XM_047441430.1XP_047297386.1  peroxisome proliferator-activated receptor alpha isoform X6

      Conserved Domains (1) summary
      cl02596
      Location:101170
      NR_DBD_like; DNA-binding domain of nuclear receptors is composed of two C4-type zinc fingers
    10. XM_047441429.1XP_047297385.1  peroxisome proliferator-activated receptor alpha isoform X5

    11. XM_047441425.1XP_047297381.1  peroxisome proliferator-activated receptor alpha isoform X1

      UniProtKB/Swiss-Prot
      B0G0X3, Q07869, Q16241, Q6I9S0, Q92486, Q92689, Q9Y3N1
      UniProtKB/TrEMBL
      F1D8S4
    12. XM_047441426.1XP_047297382.1  peroxisome proliferator-activated receptor alpha isoform X1

      UniProtKB/Swiss-Prot
      B0G0X3, Q07869, Q16241, Q6I9S0, Q92486, Q92689, Q9Y3N1
      UniProtKB/TrEMBL
      F1D8S4
    13. XM_017028839.2XP_016884328.1  peroxisome proliferator-activated receptor alpha isoform X2

      Conserved Domains (1) summary
      cd06932
      Location:67333
      NR_LBD_PPAR; The ligand binding domain of peroxisome proliferator-activated receptors
    14. XM_047441427.1XP_047297383.1  peroxisome proliferator-activated receptor alpha isoform X3

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060946.1 Alternate T2T-CHM13v2.0

      Range
      46635225..46728457
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_054325739.1XP_054181714.1  peroxisome proliferator-activated receptor alpha isoform X1

      UniProtKB/Swiss-Prot
      B0G0X3, Q07869, Q16241, Q6I9S0, Q92486, Q92689, Q9Y3N1
      UniProtKB/TrEMBL
      F1D8S4
    2. XM_054325740.1XP_054181715.1  peroxisome proliferator-activated receptor alpha isoform X1

      UniProtKB/Swiss-Prot
      B0G0X3, Q07869, Q16241, Q6I9S0, Q92486, Q92689, Q9Y3N1
      UniProtKB/TrEMBL
      F1D8S4
    3. XM_054325742.1XP_054181717.1  peroxisome proliferator-activated receptor alpha isoform X1

      UniProtKB/Swiss-Prot
      B0G0X3, Q07869, Q16241, Q6I9S0, Q92486, Q92689, Q9Y3N1
      UniProtKB/TrEMBL
      F1D8S4
    4. XM_054325743.1XP_054181718.1  peroxisome proliferator-activated receptor alpha isoform X1

      UniProtKB/Swiss-Prot
      B0G0X3, Q07869, Q16241, Q6I9S0, Q92486, Q92689, Q9Y3N1
      UniProtKB/TrEMBL
      F1D8S4
    5. XM_054325741.1XP_054181716.1  peroxisome proliferator-activated receptor alpha isoform X1

      UniProtKB/Swiss-Prot
      B0G0X3, Q07869, Q16241, Q6I9S0, Q92486, Q92689, Q9Y3N1
      UniProtKB/TrEMBL
      F1D8S4
    6. XM_054325737.1XP_054181712.1  peroxisome proliferator-activated receptor alpha isoform X1

      UniProtKB/Swiss-Prot
      B0G0X3, Q07869, Q16241, Q6I9S0, Q92486, Q92689, Q9Y3N1
      UniProtKB/TrEMBL
      F1D8S4
    7. XM_054325738.1XP_054181713.1  peroxisome proliferator-activated receptor alpha isoform X1

      UniProtKB/Swiss-Prot
      B0G0X3, Q07869, Q16241, Q6I9S0, Q92486, Q92689, Q9Y3N1
      UniProtKB/TrEMBL
      F1D8S4
    8. XM_054325748.1XP_054181723.1  peroxisome proliferator-activated receptor alpha isoform X4

    9. XM_054325750.1XP_054181725.1  peroxisome proliferator-activated receptor alpha isoform X6

    10. XM_054325749.1XP_054181724.1  peroxisome proliferator-activated receptor alpha isoform X5

    11. XM_054325744.1XP_054181719.1  peroxisome proliferator-activated receptor alpha isoform X1

      UniProtKB/Swiss-Prot
      B0G0X3, Q07869, Q16241, Q6I9S0, Q92486, Q92689, Q9Y3N1
      UniProtKB/TrEMBL
      F1D8S4
    12. XM_054325745.1XP_054181720.1  peroxisome proliferator-activated receptor alpha isoform X1

      UniProtKB/Swiss-Prot
      B0G0X3, Q07869, Q16241, Q6I9S0, Q92486, Q92689, Q9Y3N1
      UniProtKB/TrEMBL
      F1D8S4
    13. XM_054325746.1XP_054181721.1  peroxisome proliferator-activated receptor alpha isoform X2

    14. XM_054325747.1XP_054181722.1  peroxisome proliferator-activated receptor alpha isoform X3

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_001001930.2: Suppressed sequence

      Description
      NM_001001930.2: This RefSeq was temporarily suppressed because currently there is not sufficient data to support this transcript.
    2. NM_032644.3: Suppressed sequence

      Description
      NM_032644.3: This RefSeq was temporarily suppressed because currently there is not sufficient data to support this transcript.