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    LOC100912143 uncharacterized LOC100912143 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 100912143, updated on 17-Aug-2024

    Summary

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    Symbol
    LOC100912143provided by RGD
    Full Name
    uncharacterized LOC100912143provided by RGD
    Primary source
    RGD:6488764
    See related
    EnsemblRapid:ENSRNOG00000087292 AllianceGenome:RGD:6488764
    Gene type
    ncRNA
    RefSeq status
    MODEL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Expression
    Biased expression in Heart (RPKM 51.2), Liver (RPKM 39.8) and 3 other tissues See more
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    Genomic context

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    See LOC100912143 in Genome Data Viewer
    Location:
    7q13
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 7 NC_086025.1 (32313804..32340484)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 7 NC_051342.1 (30426962..30453658)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 7 NC_005106.4 (36883583..36910465)

    Chromosome 7 - NC_086025.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC134479590 Neighboring gene NADH:ubiquinone oxidoreductase subunit A13, pseudogene 1 Neighboring gene uncharacterized LOC102546992 Neighboring gene small nucleolar RNA SNORA17 Neighboring gene early endosome antigen 1 Neighboring gene ribosomal protein L6, pseudogene 8

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086025.1 Reference GRCr8

      Range
      32313804..32340484
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_010053245.1 RNA Sequence

    2. XR_593399.4 RNA Sequence

      Related
      ENSRNOT00000159701.1

    3. XR_005486876.2 RNA Sequence

      Related
      ENSRNOT00000157361.1

    4. XR_005486878.2 RNA Sequence

    5. XR_010053249.1 RNA Sequence

    6. XR_010053250.1 RNA Sequence

    7. XR_010053251.1 RNA Sequence

    8. XR_010053246.1 RNA Sequence

    9. XR_593400.4 RNA Sequence

    10. XR_010053247.1 RNA Sequence

    11. XR_010053248.1 RNA Sequence

    12. XR_005486877.2 RNA Sequence

    13. XR_593401.3 RNA Sequence

    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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