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    atf21 Atf-CREB family transcription factor Atf21 [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 2540363, updated on 18-Sep-2024

    Summary

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    Official Symbol
    atf21
    Official Full Name
    Atf-CREB family transcription factor Atf21
    Primary source
    PomBase:SPBC2F12.09c
    Locus tag
    SPOM_SPBC2F12.09C
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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    Genomic context

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    See atf21 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    1
    Sequence:
    Chromosome: II; NC_003423.3 (1723013..1724450)

    Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene mitochondrial ribosomal protein subunit L35 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene mRNA guanylyltransferase Ceg1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003423.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Fission yeast ATF/CREB family protein Atf21 plays important roles in production of normal spores. Morita T, et al. Genes Cells, 2011 Feb. PMID 21199192
    2. Isolation of multicopy suppressors of the calcium sensitivity of a mutant lacking the bZIP transcription factor Atf1 in fission yeast. Ohmiya R, et al. Mol Gen Genet, 1999 Mar. PMID 10102365
    3. Transcriptional regulatory network for sexual differentiation in fission yeast. Mata J, et al. Genome Biol, 2007. PMID 17927811, Free PMC Article
    4. Conjugation, meiosis, and the osmotic stress response are regulated by Spc1 kinase through Atf1 transcription factor in fission yeast. Shiozaki K, et al. Genes Dev, 1996 Sep 15. PMID 8824587
    5. A central role for TOR signalling in a yeast model for juvenile CLN3 disease. Bond ME, et al. Microb Cell, 2015 Nov 11. PMID 28357272, Free PMC Article

    See all (11) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. These results suggest that Atf21 is expressed and functions long after nitrogen starvation.
      Title: Fission yeast ATF/CREB family protein Atf21 plays important roles in production of normal spores.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding EXP
    Inferred from Experiment
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in regulation of transcription by RNA polymerase II IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    is_active_in nucleus HDA PubMed 

    General protein information

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    Preferred Names
    Atf-CREB family transcription factor Atf21

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003423.3 Reference assembly

      Range
      1723013..1724450
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001021604.3 → NP_595707.1  Atf-CREB family transcription factor Atf21 [Schizosaccharomyces pombe]

      See identical proteins and their annotated locations for NP_595707.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      P78962
      Conserved Domains (1) summary
      cd14687
      Location:269 → 329
      bZIP_ATF2; Basic leucine zipper (bZIP) domain of Activating Transcription Factor-2 (ATF-2) and similar proteins: a DNA-binding and dimerization domain
    Nucleotide Protein
    Heading Accession and Version

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