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    ely5 nuclear pore protein Ely5 [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 2540543, updated on 18-Sep-2024

    Summary

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    Official Symbol
    ely5
    Official Full Name
    nuclear pore protein Ely5
    Primary source
    PomBase:SPBC29A10.06c
    Locus tag
    SPOM_SPBC29A10.06C
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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    Genomic context

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    See ely5 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    3
    Sequence:
    Chromosome: II; NC_003423.3 (2547339..2548605, complement)

    Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene mitotic/meiotic cohesin complex ATPase subunit Psm1/Smc1 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene exonuclease I Exo1 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene nucleoporin, transmembrane ring glycoprotein subunit Pom152 Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003423.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Molecular basis for Nup37 and ELY5/ELYS recruitment to the nuclear pore complex. Bilokapic S, et al. Proc Natl Acad Sci U S A, 2012 Sep 18. PMID 22955883, Free PMC Article
    2. Characterization of nuclear pore complex components in fission yeast Schizosaccharomyces pombe. Asakawa H, et al. Nucleus, 2014 Mar-Apr. PMID 24637836, Free PMC Article
    3. Virtual breakdown of the nuclear envelope in fission yeast meiosis. Asakawa H, et al. Curr Biol, 2010 Nov 9. PMID 20970342
    4. The fission yeast nucleoporin Alm1 is required for proteasomal degradation of kinetochore components. Salas-Pino S, et al. J Cell Biol, 2017 Nov 6. PMID 28974540, Free PMC Article
    5. Proximity-dependent biotinylation mediated by TurboID to identify protein-protein interaction networks in yeast. Larochelle M, et al. J Cell Sci, 2019 May 31. PMID 31064814

    See all (15) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in nuclear pore complex assembly ISO
    Inferred from Sequence Orthology
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cytosol HDA PubMed 
    part_of nuclear pore IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    is_active_in nucleus HDA PubMed 

    General protein information

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    Preferred Names
    nuclear pore protein Ely5

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003423.3 Reference assembly

      Range
      2547339..2548605 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001021962.3 → NP_596051.2  nuclear pore protein Ely5 [Schizosaccharomyces pombe]

      See identical proteins and their annotated locations for NP_596051.2

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      O94384
      Conserved Domains (1) summary
      pfam13934
      Location:44 → 251
      ELYS; Nuclear pore complex assembly
    Nucleotide Protein
    Heading Accession and Version

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