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    arf6 ADP-ribosylation factor-like protein Arf6 [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 2539937, updated on 18-Sep-2024

    Summary

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    Official Symbol
    arf6
    Official Full Name
    ADP-ribosylation factor-like protein Arf6
    Primary source
    PomBase:SPBC1539.08
    Locus tag
    SPOM_SPBC1539.08
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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    Genomic context

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    See arf6 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    5
    Sequence:
    Chromosome: II; NC_003423.3 (4375729..4377177)

    Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene acyl-coenzyme A binding protein Neighboring gene glutathione-dependent formaldehyde dehydrogenase Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene anthranilate synthase component II Neighboring gene ncRNA Neighboring gene ribosome biogenesis protein Nop16

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003423.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. ADP-ribosylation factor arf6p may function as a molecular switch of new end take off in fission yeast. Fujita A. Biochem Biophys Res Commun, 2008 Feb 1. PMID 18060866
    2. Arf6 anchors Cdr2 nodes at the cell cortex to control cell size at division. Opalko HE, et al. J Cell Biol, 2022 Feb 7. PMID 34958661, Free PMC Article
    3. Haploinsufficiency of the Sec7 guanine nucleotide exchange factor gea1 impairs septation in fission yeast. Eckler AM, et al. PLoS One, 2013. PMID 23457617, Free PMC Article
    4. Systematic screen for mutants resistant to TORC1 inhibition in fission yeast reveals genes involved in cellular ageing and growth. Rallis C, et al. Biol Open, 2014 Feb 15. PMID 24463365, Free PMC Article
    5. Yeast X-chromosome-associated protein 5 (Xap5) functions with H2A.Z to suppress aberrant transcripts. Anver S, et al. EMBO Rep, 2014 Aug. PMID 24957674, Free PMC Article

    See all (10) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Arf6 anchors Cdr2 nodes at the cell cortex to control cell size at division.
      Title: Arf6 anchors Cdr2 nodes at the cell cortex to control cell size at division.
    Submit: New GeneRIF Correction

    Pathways from PubChem

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    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    enables GTP binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables GTPase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    enables protein-membrane adaptor activity IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell growth mode switching, monopolar to bipolar IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in intracellular protein transport IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in positive regulation of G2/M transition of mitotic cell cycle IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in regulation of cytokinesis IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    involved_in vesicle-mediated transport IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    part_of Cdr2 medial cortical node complex IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    is_active_in cell cortex IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    is_active_in cell cortex of cell tip IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    is_active_in cell division site IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    is_active_in division septum IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    ADP-ribosylation factor-like protein Arf6

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003423.3 Reference assembly

      Range
      4375729..4377177
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001023842.3 → NP_596822.1  ADP-ribosylation factor-like protein Arf6 [Schizosaccharomyces pombe]

      See identical proteins and their annotated locations for NP_596822.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      Q9Y7Z2
      Conserved Domains (1) summary
      cd04149
      Location:13 → 180
      Arf6; ADP ribosylation factor 6 (Arf6)
    Nucleotide Protein
    Heading Accession and Version

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