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    ctu1 cytosolic thiouridylase subunit Ctu1 [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 2540314, updated on 18-Sep-2024

    Summary

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    Official Symbol
    ctu1
    Official Full Name
    cytosolic thiouridylase subunit Ctu1
    Primary source
    PomBase:SPBC2G5.03
    Locus tag
    SPOM_SPBC2G5.03
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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    Genomic context

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    See ctu1 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    1
    Sequence:
    Chromosome: II; NC_003423.3 (2581935..2583104)

    Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene CK2 family regulatory subunit protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene COPII-coated vesicle-associated protein Erv41 Neighboring gene ncRNA Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003423.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The conserved Wobble uridine tRNA thiolase Ctu1-Ctu2 is required to maintain genome integrity. Dewez M, et al. Proc Natl Acad Sci U S A, 2008 Apr 8. PMID 18391219, Free PMC Article
    2. Translational control of cell division by Elongator. Bauer F, et al. Cell Rep, 2012 May 31. PMID 22768388, Free PMC Article
    3. Systematic screen for mutants resistant to TORC1 inhibition in fission yeast reveals genes involved in cellular ageing and growth. Rallis C, et al. Biol Open, 2014 Feb 15. PMID 24463365, Free PMC Article
    4. Proximity-dependent biotinylation mediated by TurboID to identify protein-protein interaction networks in yeast. Larochelle M, et al. J Cell Sci, 2019 May 31. PMID 31064814
    5. Expanded Interactome of the Intrinsically Disordered Protein Dss1. Schenstrøm SM, et al. Cell Rep, 2018 Oct 23. PMID 30355493, Free PMC Article

    See all (14) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    enables ATP binding ISM
    Inferred from Sequence Model
    more info
    		  
    enables nucleotidyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables tRNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables tRNA binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    contributes_to tRNA-uridine 2-sulfurtransferase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein urmylation IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in tRNA wobble position uridine thiolation IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in tRNA wobble position uridine thiolation IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of cytosolic tRNA wobble base thiouridylase complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    part_of cytosolic tRNA wobble base thiouridylase complex IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    cytosolic thiouridylase subunit Ctu1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003423.3 Reference assembly

      Range
      2581935..2583104
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001021975.3 → NP_596064.1  cytosolic thiouridylase subunit Ctu1 [Schizosaccharomyces pombe]

      See identical proteins and their annotated locations for NP_596064.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      O94282
      Conserved Domains (3) summary
      TIGR00269
      Location:206 → 308
      TIGR00269; TIGR00269 family protein
      COG0037
      Location:29 → 330
      TilS; tRNA(Ile)-lysidine synthase TilS/MesJ [Translation, ribosomal structure and biogenesis]
      cd01993
      Location:53 → 241
      Alpha_ANH_like_II; This is a subfamily of Adenine nucleotide alpha hydrolases superfamily.Adeninosine nucleotide alpha hydrolases superfamily includes N type ATP PPases and ATP sulphurylases. It forms a apha/beta/apha fold which binds to Adenosine group. This subfamily ...
    Nucleotide Protein
    Heading Accession and Version

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