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    ppk30 Ark1/Prk1 family protein kinase Ppk30 [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 2541109, updated on 18-Sep-2024

    Summary

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    Official Symbol
    ppk30
    Official Full Name
    Ark1/Prk1 family protein kinase Ppk30
    Primary source
    PomBase:SPBC6B1.02
    Locus tag
    SPOM_SPBC6B1.02
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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    Genomic context

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    See ppk30 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    1
    Sequence:
    Chromosome: II; NC_003423.3 (2627299..2630878)

    Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene TATA-binding protein-associated factor Mot1 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene pal1 family early clathrin mediated endocytosis factor, meiosis specific Pal2 Neighboring gene microtubule-site clamp monopolin complex subunit Mde4

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003423.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Mis17 is a regulatory module of the Mis6-Mal2-Sim4 centromere complex that is required for the recruitment of CenH3/CENP-A in fission yeast. Shiroiwa Y, et al. PLoS One, 2011 Mar 21. PMID 21445296, Free PMC Article
    2. Large scale screening of genetic interaction with sgf73(+) in fission yeast. Guo Y, et al. Yi Chuan, 2014 Jul. PMID 25076038
    3. Conservation and rewiring of functional modules revealed by an epistasis map in fission yeast. Roguev A, et al. Science, 2008 Oct 17. PMID 18818364, Free PMC Article
    4. Chromatin remodeller Fun30(Fft3) induces nucleosome disassembly to facilitate RNA polymerase II elongation. Lee J, et al. Nat Commun, 2017 Feb 20. PMID 28218250, Free PMC Article
    5. Hierarchical modularity and the evolution of genetic interactomes across species. Ryan CJ, et al. Mol Cell, 2012 Jun 8. PMID 22681890, Free PMC Article

    See all (12) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    enables ATP binding ISM
    Inferred from Sequence Model
    more info
    		  
    enables protein serine/threonine kinase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    involved_in actin cortical patch assembly IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in actin filament organization IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in regulation of clathrin-dependent endocytosis ISO
    Inferred from Sequence Orthology
    more info
    		  
    involved_in signaling IC
    Inferred by Curator
    more info
    		  
    Component Evidence Code Pubs
    is_active_in actin cortical patch ISO
    Inferred from Sequence Orthology
    more info
    		  
    is_active_in cytoplasm HDA PubMed 
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    Ark1/Prk1 family protein kinase Ppk30

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003423.3 Reference assembly

      Range
      2627299..2630878
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001021995.3 → NP_596081.1  Ark1/Prk1 family protein kinase Ppk30 [Schizosaccharomyces pombe]

      See identical proteins and their annotated locations for NP_596081.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      O43066
      Conserved Domains (2) summary
      smart00220
      Location:59 → 328
      S_TKc; Serine/Threonine protein kinases, catalytic domain
      cd14037
      Location:53 → 329
      STKc_NAK_like; Catalytic domain of Numb-Associated Kinase (NAK)-like Serine/Threonine kinases
    Nucleotide Protein
    Heading Accession and Version

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