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    arp9 SWI/SNF and RSC complex subunit Arp9 [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 2541540, updated on 18-Sep-2024

    Summary

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    Official Symbol
    arp9
    Official Full Name
    SWI/SNF and RSC complex subunit Arp9
    Primary source
    PomBase:SPAC1071.06
    Locus tag
    SPOM_SPAC1071.06
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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    Genomic context

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    See arp9 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    1
    Sequence:
    Chromosome: I; NC_003424.3 (3866533..3868410)

    Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ribosome methytransferase Hpm1 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene putative DNAJC9 family protein Neighboring gene 40S ribosomal protein uS19 Neighboring gene ribosomal protein P2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003424.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A genetic screen for functional partners of condensin in fission yeast. Robellet X, et al. G3 (Bethesda), 2014 Feb 19. PMID 24362309, Free PMC Article
    2. Fission yeast SWI/SNF and RSC complexes show compositional and functional differences from budding yeast. Monahan BJ, et al. Nat Struct Mol Biol, 2008 Aug. PMID 18622392, Free PMC Article
    3. Widespread cotranslational formation of protein complexes. Duncan CD, et al. PLoS Genet, 2011 Dec. PMID 22144913, Free PMC Article
    4. Rbm10 facilitates heterochromatin assembly via the Clr6 HDAC complex. Weigt M, et al. Epigenetics Chromatin, 2021 Jan 19. PMID 33468217, Free PMC Article
    5. Epe1 recruits BET family bromodomain protein Bdf2 to establish heterochromatin boundaries. Wang J, et al. Genes Dev, 2013 Sep 1. PMID 24013502, Free PMC Article

    See all (15) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II TAS
    Traceable Author Statement
    more info
    		 PubMed 
    involved_in transcription initiation-coupled chromatin remodeling IC
    Inferred by Curator
    more info
    		  
    Component Evidence Code Pubs
    part_of RSC-type complex IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    part_of SWI/SNF complex IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    is_active_in cytosol HDA PubMed 
    is_active_in nucleus HDA PubMed 
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    SWI/SNF and RSC complex subunit Arp9

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003424.3 Reference assembly

      Range
      3866533..3868410
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001019777.3 → NP_594356.1  SWI/SNF and RSC complex subunit Arp9 [Schizosaccharomyces pombe]

      See identical proteins and their annotated locations for NP_594356.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      Q9UTQ7
      Conserved Domains (1) summary
      COG5277
      Location:26 → 523
      COG5277; Actin-related protein [Cytoskeleton]
    Nucleotide Protein
    Heading Accession and Version

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