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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_022932.2 RefSeqGene
- Range
-
5000..147239
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001190241.2 → NP_001177170.1 intraflagellar transport protein 80 homolog isoform b
See identical proteins and their annotated locations for NP_001177170.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) differs in the 5' UTR and coding sequence compared to variant 1. The resulting isoform (b) is shorter at the N-terminus compared to isoform a. Variants 2 and 3 both encode the same isoform.
- Source sequence(s)
-
AB037795, AK125342, BC030774, CA421514
- Consensus CDS
-
CCDS54668.1
- UniProtKB/Swiss-Prot
-
Q9P2H3
- Related
- ENSP00000420646.1, ENST00000496589.5
- Conserved Domains (3) summary
-
- COG2319
Location:3 → 423
- WD40; WD40 repeat [General function prediction only]
- sd00039
Location:13 → 49
- 7WD40; WD40 repeat [structural motif]
- cl02567
Location:12 → 176
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
-
NM_001190242.2 → NP_001177171.1 intraflagellar transport protein 80 homolog isoform b
See identical proteins and their annotated locations for NP_001177171.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) differs in the 5' UTR and coding sequence compared to variant 1. The resulting isoform (b) is shorter at the N-terminus compared to isoform a. Variants 2 and 3 both encode the same isoform.
- Source sequence(s)
-
AB037795, CA421514, DR000297
- Consensus CDS
-
CCDS54668.1
- UniProtKB/Swiss-Prot
-
Q9P2H3
- Related
- ENSP00000418196.1, ENST00000483465.5
- Conserved Domains (3) summary
-
- COG2319
Location:3 → 423
- WD40; WD40 repeat [General function prediction only]
- sd00039
Location:13 → 49
- 7WD40; WD40 repeat [structural motif]
- cl02567
Location:12 → 176
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
-
NM_020800.3 → NP_065851.1 intraflagellar transport protein 80 homolog isoform a
See identical proteins and their annotated locations for NP_065851.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) encodes the longer isoform (a).
- Source sequence(s)
-
AB037795, AK125342, CA421514
- Consensus CDS
-
CCDS3188.1
- UniProtKB/Swiss-Prot
- B4E0K1, C9J8I0, Q3MJC4, Q86YF4, Q9P2H3, Q9UIX1
- Related
- ENSP00000312778.7, ENST00000326448.12
- Conserved Domains (2) summary
-
- sd00039
Location:110 → 145
- 7WD40; WD40 repeat [structural motif]
- cl25539
Location:17 → 254
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000003.12 Reference GRCh38.p14 Primary Assembly
- Range
-
160256986..160399225 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Alternate T2T-CHM13v2.0
Genomic
-
NC_060927.1 Alternate T2T-CHM13v2.0
- Range
-
163031586..163173837 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)