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    F21F3.6 DUF4149 domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 172109, updated on 12-Jun-2024

    Summary

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    Gene symbol
    F21F3.6
    Gene description
    DUF4149 domain-containing protein
    Locus tag
    CELE_F21F3.6
    See related
    AllianceGenome:WB:WBGene00017675
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in lysosomal membrane. [provided by Alliance of Genome Resources, Apr 2022]
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    Genomic context

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    See F21F3.6 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    4
    Sequence:
    Chromosome: I; NC_003279.8 (4911805..4914047, complement)

    Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene Protein-S-isoprenylcysteine O-methyltransferase Neighboring gene Protein kinase domain-containing protein Neighboring gene putative peptidyl-alpha-hydroxyglycine alpha-amidating lyase pgal-1 Neighboring gene Transmembrane protein 230 Neighboring gene Importin N-terminal domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003279.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916
    2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    is_active_in lysosomal membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    DUF4149 domain-containing protein
    NP_491476.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003279.8 Reference assembly

      Range
      4911805..4914047 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_059075.9 → NP_491476.1  DUF4149 domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_491476.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      P91269
    Nucleotide Protein
    Heading Accession and Version

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