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    • Showing Current items.

    EEED8.2 Uncharacterized protein [ Caenorhabditis elegans ]

    Gene ID: 173923, updated on 18-Sep-2024

    Summary

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    Official Symbol
    EEED8.2
    Official Full Name
    Uncharacterized protein
    Primary source
    WormBase:WBGene00017133
    Locus tag
    CELE_EEED8.2
    See related
    AllianceGenome:WB:WBGene00017133
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable lipid binding activity. Is expressed in hypodermis and intestine. [provided by Alliance of Genome Resources, Apr 2022]
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    Genomic context

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    See EEED8.2 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    4
    Sequence:
    Chromosome: II; NC_003280.10 (5416714..5418445)

    Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene MATH domain-containing protein Neighboring gene Uncharacterized protein Neighboring gene PHR domain-containing protein Neighboring gene ncRNA Neighboring gene Embryonic developmental protein tofu-6 Neighboring gene Apolipoprotein L, 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003280.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Novel LOTUS-domain proteins are organizational hubs that recruit C. elegans Vasa to germ granules. Cipriani PG, et al. Elife, 2021 Jul 5. PMID 34223818, Free PMC Article
    2. EPIC: software toolkit for elution profile-based inference of protein complexes. Hu LZ, et al. Nat Methods, 2019 Aug. PMID 31308550, Free PMC Article
    3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables lipid binding IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Uncharacterized protein
    NP_495026.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003280.10 Reference assembly

      Range
      5416714..5418445
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_062625.6 → NP_495026.1  Uncharacterized protein CELE_EEED8.2 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_495026.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q09529
      Conserved Domains (1) summary
      pfam04111
      Location:41 → 121
      APG6; Autophagy protein Apg6
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q09529.1

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