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    rcat-1 C2H2-type domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 176844, updated on 2-Nov-2024

    Summary

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    Official Symbol
    rcat-1
    Official Full Name
    C2H2-type domain-containing protein
    Primary source
    WormBase:WBGene00019824
    Locus tag
    CELE_R02D3.7
    See related
    AllianceGenome:WB:WBGene00019824
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Is expressed in several structures, including alimentary system; excretory cell; germ line; muscular system; and ventral nerve cord. [provided by Alliance of Genome Resources, Nov 2024]
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    Genomic context

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    See rcat-1 in Genome Data Viewer
    Location:
    chromosome: IV
    Exon count:
    7
    Sequence:
    Chromosome: IV; NC_003282.8 (253619..255429, complement)

    Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene Conserved oligomeric Golgi complex subunit 8 Neighboring gene Saccharopine dehydrogenase Neighboring gene Ground-like domain-containing protein Neighboring gene Exonuclease domain-containing protein Neighboring gene Nematode cuticle collagen N-terminal domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003282.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Deficiency in RCAT-1 Function Causes Dopamine Metabolism Related Behavioral Disorders in Caenorhabditis elegans. Jeong H, et al. Int J Mol Sci, 2022 Feb 21. PMID 35216508, Free PMC Article
    2. An Intricate Network Involving the Argonaute ALG-1 Modulates Organismal Resistance to Oxidative Stress. Vergani-Junior CA, et al. Nat Commun, 2024 Apr 9. PMID 38594249, Free PMC Article
    3. Extensive rewiring and complex evolutionary dynamics in a C. elegans multiparameter transcription factor network. Reece-Hoyes JS, et al. Mol Cell, 2013 Jul 11. PMID 23791784, Free PMC Article
    4. Novel LOTUS-domain proteins are organizational hubs that recruit C. elegans Vasa to germ granules. Cipriani PG, et al. Elife, 2021 Jul 5. PMID 34223818, Free PMC Article
    5. EPIC: software toolkit for elution profile-based inference of protein complexes. Hu LZ, et al. Nat Methods, 2019 Aug. PMID 31308550, Free PMC Article

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    C2H2-type domain-containing protein
    NP_499886.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003282.8 Reference assembly

      Range
      253619..255429 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_067485.6 → NP_499886.1  C2H2-type domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_499886.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      O44505
    Nucleotide Protein
    Heading Accession and Version

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