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    FAM151A family with sequence similarity 151 member A [ Homo sapiens (human) ]

    Gene ID: 338094, updated on 2-Nov-2024

    Summary

    Official Symbol
    FAM151Aprovided by HGNC
    Official Full Name
    family with sequence similarity 151 member Aprovided by HGNC
    Primary source
    HGNC:HGNC:25032
    See related
    Ensembl:ENSG00000162391 AllianceGenome:HGNC:25032
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    C1orf179
    Summary
    Located in extracellular exosome. Implicated in colorectal adenocarcinoma. [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Biased expression in kidney (RPKM 135.9), small intestine (RPKM 34.8) and 1 other tissue See more
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    See FAM151A in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (54609181..54623525, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (54493064..54507411, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (55074854..55089198, complement)

    Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene long intergenic non-protein coding RNA 2784 Neighboring gene MPRA-validated peak241 silencer Neighboring gene transaldolase 1 pseudogene 1 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 920 Neighboring gene heterogeneous nuclear ribonucleoprotein A1 pseudogene 63 Neighboring gene acyl-CoA thioesterase 11 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:55035141-55035653 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:55037069-55037592 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:55037593-55038114 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:55044894-55045404 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:55045405-55045913 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:55059979-55060801 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 1065 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr1:55102633-55103264 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:55106005-55106518 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:55106519-55107031 Neighboring gene MPRA-validated peak242 silencer Neighboring gene MROH7-TTC4 readthrough (NMD candidate) Neighboring gene maestro heat like repeat family member 7 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:55145240-55146100 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:55163752-55164252 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:55164253-55164753 Neighboring gene MPRA-validated peak243 silencer Neighboring gene H3K27ac hESC enhancer GRCh37_chr1:55181271-55181772 Neighboring gene tetratricopeptide repeat domain 4

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Interactions

    General gene information

    Clone Names

    • MGC27169

    Gene Ontology Provided by GOA

    Component Evidence Code Pubs
    located_in extracellular exosome PubMed 
    is_active_in extracellular space  
    located_in membrane PubMed 

    General protein information

    Preferred Names
    protein FAM151A
    Names
    hyporthetical protein MGC27169

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_176782.3NP_788954.2  protein FAM151A

      See identical proteins and their annotated locations for NP_788954.2

      Status: VALIDATED

      Source sequence(s)
      AK091901, AY358629, BC020874, DB335516
      Consensus CDS
      CCDS594.1
      UniProtKB/Swiss-Prot
      Q5VUG5, Q6DKH5, Q6UWV0, Q8NAX9, Q8WW52, Q96KY5
      Related
      ENSP00000306888.2, ENST00000302250.7
      Conserved Domains (1) summary
      pfam10223
      Location:66306
      DUF2181; Uncharacterized conserved protein (DUF2181)

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

      Range
      54609181..54623525 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_047419139.1XP_047275095.1  protein FAM151A isoform X1

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060925.1 Alternate T2T-CHM13v2.0

      Range
      54493064..54507411 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_054336242.1XP_054192217.1  protein FAM151A isoform X1

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