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    ECM13 Ecm13p [ Saccharomyces cerevisiae S288C ]

    Gene ID: 852237, updated on 29-Jun-2024

    Summary

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    Gene symbol
    ECM13
    Gene description
    Ecm13p
    Primary source
    FungiDB:YBL043W
    Locus tag
    YBL043W
    See related
    SGD:S000000139; AllianceGenome:SGD:S000000139; VEuPathDB:YBL043W
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Saccharomyces cerevisiae S288C (strain: S288C)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
    Summary
    Predicted to be involved in cell wall organization. [provided by Alliance of Genome Resources, Apr 2022]
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    Genomic context

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    See ECM13 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    1
    Sequence:
    Chromosome: II; NC_001134.8 (136688..137461)

    Chromosome II - NC_001134.8Genomic Context describing neighboring genes Neighboring gene ubiquinol--cytochrome-c reductase subunit COR1 Neighboring gene uncharacterized protein Neighboring gene uridine permease Neighboring gene proteasome core particle subunit beta 6

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_001134.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Construction and genetic analysis of S. cerevisiae deletants of six novel ORFs from chromosome II. Malagón F, et al. Yeast, 1999 Jul. PMID 10407275
    2. Exploring whole-genome duplicate gene retention with complex genetic interaction analysis. Kuzmin E, et al. Science, 2020 Jun 26. PMID 32586993, Free PMC Article
    3. Tunicamycin Sensitivity-Suppression by High Gene Dosage Reveals New Functions of the Yeast Hog1 MAP Kinase. Hernández-Elvira M, et al. Cells, 2019 Jul 12. PMID 31336877, Free PMC Article
    4. Specific transcriptional responses induced by 8-methoxypsoralen and UVA in yeast. Dardalhon M, et al. FEMS Yeast Res, 2007 Sep. PMID 17608707, Free PMC Article
    5. Large scale identification of genes involved in cell surface biosynthesis and architecture in Saccharomyces cerevisiae. Lussier M, et al. Genetics, 1997 Oct. PMID 9335584, Free PMC Article

    See all (20) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by SGD

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    involved_in cell wall organization IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    Ecm13p
    NP_009510.1
    • Non-essential hypothetical protein; induced by treatment with 8-methoxypsoralen and UVA irradiation; ECM13 has a paralog, YJR115W, that arose from the whole genome duplication

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001134.8 Reference assembly

      Range
      136688..137461
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001178283.1 → NP_009510.1  TPA: Ecm13p [Saccharomyces cerevisiae S288C]

      See identical proteins and their annotated locations for NP_009510.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      D6VPV5, P38195
      UniProtKB/TrEMBL
      A0A6L0YSV1, A6ZKQ3, B3LNI2, C7GNB9, C8Z3Q4, G2W8W4
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P38195.1

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