Tmem132e transmembrane protein 132E [Rattus norvegicus (Norway rat)] - Gene

Summary

Official Symbol: Tmem132eprovided by RGD
Official Full Name: transmembrane protein 132Eprovided by RGD
Primary source: RGD:1565522
See related: EnsemblRapid:ENSRNOG00000007455 AllianceGenome:RGD:1565522
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Rattus norvegicus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as: RGD1565522
Summary: Predicted to be involved in posterior lateral line neuromast hair cell development. Predicted to be located in cell body. Human ortholog(s) of this gene implicated in autosomal recessive nonsyndromic deafness 99. Orthologous to human TMEM132E (transmembrane protein 132E). [provided by Alliance of Genome Resources, Apr 2022]
Expression: Biased expression in Brain (RPKM 32.2), Uterus (RPKM 12.1) and 9 other tissues See more
Orthologs: human mouse all
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Genomic context

Location:: 10q26

Exon count:: 9

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCr8 (GCF_036323735.1)	10	NC_086028.1 (67828475..67884398)
RS_2023_06	previous assembly	mRatBN7.2 (GCF_015227675.2)	10	NC_051345.1 (67330863..67386790)
106	previous assembly	Rnor_6.0 (GCF_000001895.5)	10	NC_005109.4 (69735534..69794975)

Chromosome 10 - NC_086028.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
BioProject: PRJNA238328
Publication: PMID 24510058
Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Markers

D11Bhm141 (e-PCR), detects polymorphism
- UniSTS:141579

D10Chm168 (e-PCR)
- UniSTS:518183

D11Pas23 (e-PCR), detects polymorphism
- UniSTS:259418

UniSTS:259419 (e-PCR)
- UniSTS:259419

D11Pas23 (e-PCR), detects polymorphism
- UniSTS:259419

D10Chm167 (e-PCR)
- UniSTS:518025

22.MMHAP6FLH1.seq (e-PCR), detects polymorphism
- UniSTS:123572

BI293876 (e-PCR)
- UniSTS:245733

Gene Ontology Provided by RGD

Process	Evidence Code	Pubs
involved_in biological_process	ND No biological Data available more info
involved_in posterior lateral line neuromast hair cell development	ISO Inferred from Sequence Orthology more info

Component	Evidence Code	Pubs
located_in cell body	ISO Inferred from Sequence Orthology more info
located_in membrane	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: transmembrane protein 132E

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.