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    TEX47 testis expressed 47 [ Homo sapiens (human) ]

    Gene ID: 219557, updated on 17-Sep-2024

    Summary

    Official Symbol
    TEX47provided by HGNC
    Official Full Name
    testis expressed 47provided by HGNC
    Primary source
    HGNC:HGNC:22402
    See related
    Ensembl:ENSG00000164645 AllianceGenome:HGNC:22402
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    DYBLUF; C7orf62
    Expression
    Restricted expression toward testis (RPKM 4.5) See more
    Orthologs
    NEW
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    Genomic context

    See TEX47 in Genome Data Viewer
    Location:
    7q21.13
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 7 NC_000007.14 (88794106..88795737, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 7 NC_060931.1 (90044741..90046372, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 7 NC_000007.13 (88423420..88425051, complement)

    Chromosome 7 - NC_000007.14Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107986816 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:88389160-88389704 Neighboring gene COX6A1 pseudogene 7 Neighboring gene zinc finger protein 804B Neighboring gene ReSE screen-validated silencer GRCh37_chr7:88725221-88725383 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr7:88732804-88733496 Neighboring gene ReSE screen-validated silencer GRCh37_chr7:89018574-89018770 Neighboring gene uncharacterized LOC105375387 Neighboring gene ReSE screen-validated silencer GRCh37_chr7:89179295-89179509 Neighboring gene uncharacterized LOC107986817

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Phenotypes

    EBI GWAS Catalog

    Description
    Novel associations for hypothyroidism include known autoimmune risk loci.
    EBI GWAS Catalog

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General protein information

    Preferred Names
    testis-expressed protein 47
    Names
    dynein-associated BLUF protein
    uncharacterized protein C7orf62

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_152706.4NP_689919.1  testis-expressed protein 47

      See identical proteins and their annotated locations for NP_689919.1

      Status: VALIDATED

      Source sequence(s)
      AC002127, BC028365
      Consensus CDS
      CCDS34678.1
      UniProtKB/Swiss-Prot
      Q8TBZ9
      Related
      ENSP00000297203.2, ENST00000297203.3

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000007.14 Reference GRCh38.p14 Primary Assembly

      Range
      88794106..88795737 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060931.1 Alternate T2T-CHM13v2.0

      Range
      90044741..90046372 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)