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    PAU13 seripauperin PAU13 [ Saccharomyces cerevisiae S288C ]

    Gene ID: 856339, updated on 17-May-2024

    Summary

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    Gene symbol
    PAU13
    Gene description
    seripauperin PAU13
    Primary source
    FungiDB:YHL046C
    Locus tag
    YHL046C
    See related
    SGD:S000001038; AllianceGenome:SGD:S000001038; VEuPathDB:YHL046C
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Saccharomyces cerevisiae S288C (strain: S288C)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
    Summary
    Predicted to be a structural constituent of cell wall. Predicted to be involved in fungal-type cell wall organization. Predicted to be active in fungal-type cell wall. [provided by Alliance of Genome Resources, Apr 2022]
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    Genomic context

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    See PAU13 in Genome Data Viewer
    Location:
    chromosome: VIII
    Exon count:
    1
    Sequence:
    Chromosome: VIII; NC_001140.6 (11923..12285, complement)

    Chromosome VIII - NC_001140.6Genomic Context describing neighboring genes Neighboring gene Cos8p Neighboring gene siderophore transporter Neighboring gene Pxp3p Neighboring gene DUP240 family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_001140.6

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Global gene expression during short-term ethanol stress in Saccharomyces cerevisiae. Alexandre H, et al. FEBS Lett, 2001 Jun 1. PMID 11389906
    2. Set4 regulates stress response genes and coordinates histone deacetylases within yeast subtelomeres. Jethmalani Y, et al. Life Sci Alliance, 2021 Dec. PMID 34625508, Free PMC Article
    3. Functional analyses of PAU genes in Saccharomyces cerevisiae. Luo Z, et al. Microbiology (Reading), 2009 Dec. PMID 19762443
    4. Saccharomyces cerevisiae S288C genome annotation: a working hypothesis. Fisk DG, et al. Yeast, 2006 Sep. PMID 17001629, Free PMC Article
    5. Yeast Ssd1 is a non-enzymatic member of the RNase II family with an alternative RNA recognition site. Bayne RA, et al. Nucleic Acids Res, 2022 Mar 21. PMID 34302485, Free PMC Article

    See all (24) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by SGD

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    enables structural constituent of cell wall IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    involved_in fungal-type cell wall organization IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  
    is_active_in fungal-type cell wall IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    seripauperin PAU13
    NP_011817.1
    • hypothetical protein; member of the seripauperin multigene family encoded mainly in subtelomeric regions; expression is induced after ethanol shock; SWAT-GFP and mCherry fusion proteins localize to the endoplasmic reticulum and vacuole respectively

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001140.6 Reference assembly

      Range
      11923..12285 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001179126.1 → NP_011817.1  TPA: seripauperin PAU13 [Saccharomyces cerevisiae S288C]

      See identical proteins and their annotated locations for NP_011817.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      D3DKS5, P38725
      UniProtKB/TrEMBL
      A0A8H4C0G0, A6ZKJ1, A6ZX85, B3LFD1, C8ZA19, G2WBR8, G2WFW8, G2WFX5
      Conserved Domains (1) summary
      pfam00660
      Location:26 → 115
      SRP1_TIP1; Seripauperin and TIP1 family
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P38725.1

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