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    swt-3 Sugar transporter SWEET1 [ Caenorhabditis elegans ]

    Gene ID: 177972, updated on 2-Nov-2024

    Summary

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    Official Symbol
    swt-3
    Official Full Name
    Sugar transporter SWEET1
    Primary source
    WormBase:WBGene00007384
    Locus tag
    CELE_C06G8.1
    See related
    AllianceGenome:WB:WBGene00007384
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable sugar transmembrane transporter activity. Predicted to be involved in carbohydrate transport. Predicted to be located in Golgi membrane. Predicted to be active in membrane. Is expressed in body wall musculature; hypodermis; intestine; somatic gonad precursor; and spermatheca. Orthologous to human SLC50A1 (solute carrier family 50 member 1). [provided by Alliance of Genome Resources, Nov 2024]
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    Genomic context

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    See swt-3 in Genome Data Viewer
    Location:
    chromosome: IV
    Exon count:
    3
    Sequence:
    Chromosome: IV; NC_003282.8 (10778985..10780683, complement)

    Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene Uncharacterized protein Neighboring gene 6-phosphogluconate dehydrogenase, decarboxylating Neighboring gene Inositol polyphosphate-related phosphatase domain-containing protein Neighboring gene Serpentine receptor class delta-7 Neighboring gene ncRNA Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003282.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. swt-3 transcripts are expressed in Z1/Z4 during embryogenesis and in the adult spermatheca. Updike D. MicroPubl Biol, 2017 Jul 20. PMID 32550352, Free PMC Article
    2. A starvation-induced noncoding RNA modulates expression of Dicer-regulated genes. Hellwig S, et al. Proc Natl Acad Sci U S A, 2008 Sep 2. PMID 18723671, Free PMC Article
    3. A map of the interactome network of the metazoan C. elegans. Li S, et al. Science, 2004 Jan 23. PMID 14704431, Free PMC Article
    4. OrthoList: a compendium of C. elegans genes with human orthologs. Shaye DD, et al. PLoS One, 2011. PMID 21647448, Free PMC Article
    5. OrthoList 2: A New Comparative Genomic Analysis of Human and Caenorhabditis elegans Genes. Kim W, et al. Genetics, 2018 Oct. PMID 30120140, Free PMC Article

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables sugar transmembrane transporter activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables sugar transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in carbohydrate transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in carbohydrate transport IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in carbohydrate transport ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Component Evidence Code Pubs
    located_in Golgi membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    is_active_in membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Sugar transporter SWEET1
    NP_502000.1
    • Partially confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003282.8 Reference assembly

      Range
      10778985..10780683 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_069599.7 → NP_502000.1  Sugar transporter SWEET1 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_502000.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q17757
      Conserved Domains (1) summary
      pfam03083
      Location:128 → 213
      MtN3_slv; Sugar efflux transporter for intercellular exchange
    Nucleotide Protein
    Heading Accession and Version

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