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    JIP4 Jip4p [ Saccharomyces cerevisiae S288C ]

    Gene ID: 852086, updated on 28-Oct-2024

    Summary

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    Official Symbol
    JIP4
    Official Full Name
    Jip4p
    Primary source
    SGD:S000002883
    Locus tag
    YDR475C
    See related
    AllianceGenome:SGD:S000002883; FungiDB:YDR475C; VEuPathDB:YDR475C
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Saccharomyces cerevisiae S288C (strain: S288C)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
    Also known as
    YDR474C
    Summary
    Predicted to be involved in regulation of mRNA splicing, via spliceosome. Predicted to be part of spliceosomal complex. [provided by Alliance of Genome Resources, Oct 2024]
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    Genomic context

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    See JIP4 in Genome Data Viewer
    Location:
    chromosome: IV
    Exon count:
    1
    Sequence:
    Chromosome: IV; NC_001136.10 (1407464..1410094, complement)

    Chromosome IV - NC_001136.10Genomic Context describing neighboring genes Neighboring gene TRAPP subunit TRS31 Neighboring gene U4/U6-U5 snRNP complex subunit PRP3 Neighboring gene uncharacterized protein Neighboring gene AMP-activated serine/threonine-protein kinase catalytic subunit SNF1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_001136.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genomic exploration of the hemiascomycetous yeasts: 4. The genome of Saccharomyces cerevisiae revisited. Blandin G, et al. FEBS Lett, 2000 Dec 22. PMID 11152879
    2. The jmjN and jmjC domains of the yeast zinc finger protein Gis1 interact with 19 proteins involved in transcription, sumoylation and DNA repair. Tronnersjö S, et al. Mol Genet Genomics, 2007 Jan. PMID 17043893
    3. The calcineurin signaling network evolves via conserved kinase-phosphatase modules that transcend substrate identity. Goldman A, et al. Mol Cell, 2014 Aug 7. PMID 24930733, Free PMC Article
    4. Noncanonical regulation of phosphatidylserine metabolism by a Sec14-like protein and a lipid kinase. Wang Y, et al. J Cell Biol, 2020 May 4. PMID 32303746, Free PMC Article
    5. Heterozygous screen in Saccharomyces cerevisiae identifies dosage-sensitive genes that affect chromosome stability. Strome ED, et al. Genetics, 2008 Mar. PMID 18245329, Free PMC Article

    See all (32) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by SGD

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    involved_in regulation of mRNA splicing, via spliceosome IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  
    part_of spliceosomal complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    Jip4p
    NP_010763.2
    • hypothetical protein; previously annotated as two separate ORFs, YDR474C and YDR475C, which were merged as a result of corrections to the systematic reference sequence; JIP4 has a paralog, YOR019W, that arose from the whole genome duplication

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001136.10 Reference assembly

      Range
      1407464..1410094 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001180783.1 → NP_010763.2  TPA: Jip4p [Saccharomyces cerevisiae S288C]

      See identical proteins and their annotated locations for NP_010763.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      D6VT98, Q03361, Q66RD2
      UniProtKB/TrEMBL
      A6ZZ64, N1P7D0
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q03361.2

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