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    uncharacterized protein [ Saccharomyces cerevisiae S288C ]

    Gene ID: 856359, updated on 2-Nov-2024

    Summary

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    Official Full Name
    uncharacterized protein
    Primary source
    SGD:S000001018
    Locus tag
    YHL026C
    See related
    AllianceGenome:SGD:S000001018; FungiDB:YHL026C; VEuPathDB:YHL026C
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Saccharomyces cerevisiae S288C (strain: S288C)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
    Summary
    Located in cell periphery. [provided by Alliance of Genome Resources, Nov 2024]
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    Genomic context

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    Location:
    chromosome: VIII
    Exon count:
    1
    Sequence:
    Chromosome: VIII; NC_001140.6 (53219..54166, complement)

    Chromosome VIII - NC_001140.6Genomic Context describing neighboring genes Neighboring gene Wsc4p Neighboring gene alkaline-responsive transcriptional regulator RIM101 Neighboring gene Snf6p Neighboring gene Rim4p

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_001140.6

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Unraveling networks of co-regulated genes on the sole basis of genome sequences. Brohée S, et al. Nucleic Acids Res, 2011 Aug. PMID 21572103, Free PMC Article
    2. Systems analysis of the genetic interaction network of yeast molecular chaperones. Rizzolo K, et al. Mol Omics, 2018 Apr 16. PMID 29659649
    3. Complete nucleotide sequence of Saccharomyces cerevisiae chromosome VIII. Johnston M, et al. Science, 1994 Sep 30. PMID 8091229
    4. Functional profiling of the Saccharomyces cerevisiae genome. Giaever G, et al. Nature, 2002 Jul 25. PMID 12140549
    5. Association of yeast Upf1p with direct substrates of the NMD pathway. Johansson MJ, et al. Proc Natl Acad Sci U S A, 2007 Dec 26. PMID 18087042, Free PMC Article

    See all (13) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by SGD

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in cell periphery HDA PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    NP_011837.2
    • hypothetical protein; transcriptionally regulated by Upc2p via an upstream sterol response element; SWAT-GFP fusion protein localizes to the cell periphery, while mCherry fusion localizes to both the cell periphery and vacuole; YHL026C is not an essential gene; in 2005 the start site was moved 141 nt upstream (see Locus History)

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001140.6 Reference assembly

      Range
      53219..54166 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001179106.1 → NP_011837.2  TPA: uncharacterized protein YHL026C [Saccharomyces cerevisiae S288C]

      See identical proteins and their annotated locations for NP_011837.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      D3DKU2, P38740
      UniProtKB/TrEMBL
      B3LS93, B5VJQ3, C7GIR0, C8ZA38, N1P293
      Conserved Domains (1) summary
      pfam10445
      Location:169 → 263
      DUF2456; Protein of unknown function (DUF2456)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P38740.2

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