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    LOC102724262 uncharacterized LOC102724262 [ Homo sapiens (human) ]

    Gene ID: 102724262, updated on 17-Sep-2024

    Summary

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    Gene symbol
    LOC102724262
    Gene description
    uncharacterized LOC102724262
    Gene type
    ncRNA
    RefSeq status
    MODEL
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Broad expression in lung (RPKM 1.4), placenta (RPKM 1.2) and 24 other tissues See more
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    Genomic context

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    See LOC102724262 in Genome Data Viewer
    Location:
    17p13.1
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 17 NC_000017.11 (8504904..8513834)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 17 NC_060941.1 (8411015..8419916)

    Chromosome 17 - NC_000017.11Genomic Context describing neighboring genes Neighboring gene Sharpr-MPRA regulatory regions 4336 and 10869 Neighboring gene nudE neurodevelopment protein 1 like 1 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 8182 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 8183 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 8184 Neighboring gene MPRA-validated peak2716 silencer Neighboring gene MPRA-validated peak2717 silencer Neighboring gene Sharpr-MPRA regulatory region 9669 Neighboring gene uncharacterized LOC107987245 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:8390687-8391187 Neighboring gene Sharpr-MPRA regulatory region 1803 Neighboring gene myosin heavy chain 10 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr17:8416542-8417741 Neighboring gene RNA, U7 small nuclear 43 pseudogene Neighboring gene Sharpr-MPRA regulatory region 10362 Neighboring gene Sharpr-MPRA regulatory region 2377 Neighboring gene ribosomal protein S26 pseudogene 53 Neighboring gene peptidylprolyl isomerase A pseudogene 52

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    See Variation Viewer (GRCh38)

    Genotypes

    NCBI Reference Sequences (RefSeq)

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    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000017.11 Reference GRCh38.p14 Primary Assembly

      Range
      8504904..8513834
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_934210.3 RNA Sequence

    2. XR_001752779.2 RNA Sequence

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060941.1 Alternate T2T-CHM13v2.0

      Range
      8411015..8419916
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_007087869.1 RNA Sequence

    2. XR_007087868.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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