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    LOC101926959 uncharacterized LOC101926959 [ Homo sapiens (human) ]

    Gene ID: 101926959, updated on 27-Aug-2024

    Summary

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    Gene symbol
    LOC101926959
    Gene description
    uncharacterized LOC101926959
    Gene type
    ncRNA
    RefSeq status
    MODEL
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Restricted expression toward lung (RPKM 13.9) See more
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    Genomic context

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    Location:
    2q11.1
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (95665550..95668724)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (96172169..96175346)

    Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124905589 Neighboring gene UBTF like 3 (pseudogene) Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:96314951-96315641 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:96349017-96349517 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:96420911-96421411 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:96427757-96428671 Neighboring gene MPRA-validated peak3793 silencer Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:96444078-96444634 Neighboring gene glycerol-3-phosphate acyltransferase 2, mitochondrial Neighboring gene glycerol-3-phosphate acyltransferase 2 pseudogene 1 Neighboring gene long intergenic non-protein coding RNA 342

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    See Variation Viewer (GRCh38)

    General gene information

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    Clone Names

    • AC008268.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

      Range
      95665550..95668724
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_007087142.1 RNA Sequence

    Reference GRCh38.p14 PATCHES

    Genomic

    1. NW_025791760.1 Reference GRCh38.p14 PATCHES

      Range
      427825..431002
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_923078.3 RNA Sequence

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060926.1 Alternate T2T-CHM13v2.0

      Range
      96172169..96175346
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_007072305.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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