LINC02086 long intergenic non-protein coding RNA 2086 [Homo sapiens (human)] - Gene

Summary

Official Symbol: LINC02086provided by HGNC
Official Full Name: long intergenic non-protein coding RNA 2086provided by HGNC
Primary source: HGNC:HGNC:52936
See related: AllianceGenome:HGNC:52936
Gene type: ncRNA
RefSeq status: VALIDATED
Organism: Homo sapiens
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression: Biased expression in colon (RPKM 2.5), appendix (RPKM 0.5) and 4 other tissues See more
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Genomic context

See LINC02086 in Genome Data Viewer

Location:: 17q21.32

Exon count:: 12

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCh38.p14 (GCF_000001405.40)	17	NC_000017.11 (48642627..48707346)
RS_2024_08	current	T2T-CHM13v2.0 (GCF_009914755.1)	17	NC_060941.1 (49506223..49570947)
RS_2024_09	previous assembly	GRCh37.p13 (GCF_000001405.25)	17	NC_000017.10 (46719989..46784708)

Chromosome 17 - NC_000017.11 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
BioProject: PRJEB4337
Publication: PMID 24309898
Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

LINC02086 promotes cell viability and inhibits cell apoptosis in breast cancer by sponging miR-6757-5p and up-regulating EPHA2.
Title: LINC02086 promotes cell viability and inhibits cell apoptosis in breast cancer by sponging miR-6757-5p and up-regulating EPHA2.

Submit: New GeneRIF Correction

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

NR_189644.1 RNA Sequence

Status: VALIDATED

Source sequence(s)

AC091179, AC103702
NR_189645.1 RNA Sequence

Status: VALIDATED

Source sequence(s)

AC091179, AC103702
NR_189646.1 RNA Sequence

Status: VALIDATED

Source sequence(s)

AC091179, AC103702
NR_189647.1 RNA Sequence

Status: VALIDATED

Source sequence(s)

AC091179, AC103702
NR_189648.1 RNA Sequence

Status: VALIDATED

Source sequence(s)

AC091179, AC103702