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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_030011.2Â RefSeqGene
- Range
-
10962..93417
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001206739.2 → NP_001193668.1  centromere protein R isoform 1
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) represents the longest transcript and encodes the longest isoform (1).
- Source sequence(s)
-
AA873717, BC014385, BU853146, BX004807
- Consensus CDS
-
CCDS55603.1
- UniProtKB/Swiss-Prot
-
Q13352
- Related
- ENSP00000360133.3, ENST00000371092.7
- Conserved Domains (2) summary
-
- pfam06729
Location:66 → 200
- CENP-R; Kinetochore component, CENP-R
- pfam13900
Location:6 → 40
- GVQW; Putative domain of unknown function
-
NM_001347145.2 → NP_001334074.1  centromere protein R isoform 3
Status: REVIEWED
- Source sequence(s)
-
AA873717, BU853146, CN364268, U37139
-
NM_001347147.2 → NP_001334076.1  centromere protein R isoform 4
Status: REVIEWED
- Source sequence(s)
-
AL592218, BU633831, BX004807
- Conserved Domains (1) summary
-
- pfam06729
Location:27 → 162
- CENP-R; Kinetochore component, CENP-R
-
NM_001347148.2 → NP_001334077.1  centromere protein R isoform 5
Status: REVIEWED
- Source sequence(s)
-
AA873717, AL592218, BG548447, U37139
-
NM_014288.5 → NP_055103.3  centromere protein R isoform 2
See identical proteins and their annotated locations for NP_055103.3
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) lacks an alternate in-frame exon in the 5' coding region, compared to variant 1. Isoform 2 is shorter, compared to isoform 1.
- Source sequence(s)
-
AA873717, BC009929, BU853146
- Consensus CDS
-
CCDS30736.1
- UniProtKB/Swiss-Prot
- B2R7D8, Q13352, Q13353, Q5RJ42, Q5RJ44, Q5RJ45, Q7KYX2, Q96CD5, Q9UKB6
- Related
- ENSP00000271002.10, ENST00000271002.15
- Conserved Domains (1) summary
-
- pfam06729
Location:27 → 161
- CENP-R; Kinetochore component, CENP-R
RNA
-
NR_045147.2 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) has an additional exon, compared to variant 1. This variant is represented as non-coding because the use of the 5'-most expected translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AA873717, BU853146, U37139