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    YGR117C uncharacterized protein [ Saccharomyces cerevisiae S288C ]

    Gene ID: 853014, updated on 26-Jun-2024

    Summary

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    Gene symbol
    YGR117C
    Gene description
    uncharacterized protein
    Primary source
    FungiDB:YGR117C
    Locus tag
    YGR117C
    See related
    SGD:S000003349; AllianceGenome:SGD:S000003349; VEuPathDB:YGR117C
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Saccharomyces cerevisiae S288C (strain: S288C)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
    Summary
    Located in cytoplasm. [provided by Alliance of Genome Resources, Apr 2022]
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    Genomic context

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    See YGR117C in Genome Data Viewer
    Location:
    chromosome: VII
    Exon count:
    1
    Sequence:
    Chromosome: VII; NC_001139.9 (725049..726479, complement)

    Chromosome VII - NC_001139.9Genomic Context describing neighboring genes Neighboring gene Dam1p Neighboring gene chromatin-remodeling histone chaperone SPT6 Neighboring gene ribosomal 40S subunit protein S23A Neighboring gene FG-nucleoporin NUP57

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_001139.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Navigating the chaperone network: an integrative map of physical and genetic interactions mediated by the hsp90 chaperone. Zhao R, et al. Cell, 2005 Mar 11. PMID 15766533
    2. The nucleotide sequence of Saccharomyces cerevisiae chromosome VII. Tettelin H, et al. Nature, 1997 May 29. PMID 9169869
    3. The 4E-BP Caf20p Mediates Both eIF4E-Dependent and Independent Repression of Translation. Castelli LM, et al. PLoS Genet, 2015 May. PMID 25973932, Free PMC Article
    4. A comprehensive analysis of protein-protein interactions in Saccharomyces cerevisiae. Uetz P, et al. Nature, 2000 Feb 10. PMID 10688190
    5. A synthetic genetic array screen for interactions with the RNA helicase DED1 during cell stress in budding yeast. Carey SB, et al. G3 (Bethesda), 2023 Jan 12. PMID 36409020, Free PMC Article

    See all (13) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by SGD

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    involved_in regulation of primary metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm HDA PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein
    NP_011632.3
    • hypothetical protein; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001139.9 Reference assembly

      Range
      725049..726479 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001181246.3 → NP_011632.3  TPA: uncharacterized protein YGR117C [Saccharomyces cerevisiae S288C]

      See identical proteins and their annotated locations for NP_011632.3

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      D6VUP8, P53270
      UniProtKB/TrEMBL
      A0A8H4FCY1, A6ZUD0, B3LIB2, B5VJ63, C7GPR7, C8Z908, N1P412
      Conserved Domains (1) summary
      smart00667
      Location:12 → 39
      LisH; Lissencephaly type-1-like homology motif
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P53270.1

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