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The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference ROS_Cfam_1.0
Genomic
-
NC_051821.1 Reference ROS_Cfam_1.0
- Range
-
49341557..49373017 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_038691616.1 → XP_038547544.1 semaphorin-4F isoform X4
- UniProtKB/TrEMBL
- A0A8C0QBJ9, A0A8I3NZS3
- Conserved Domains (4) summary
-
- cd11261
Location:30 → 489
- Sema_4F; The Sema domain, a protein interacting module, of semaphorin 4F (Sema4F)
- smart00423
Location:490 → 541
- PSI; domain found in Plexins, Semaphorins and Integrins
- cd00096
Location:548 → 553
- Ig; Ig strand A [structural motif]
- cl11960
Location:548 → 627
- Ig; Immunoglobulin domain
-
XM_038691614.1 → XP_038547542.1 semaphorin-4F isoform X2
- UniProtKB/TrEMBL
- A0A8C0QBD4, A0A8I3P073
- Related
- ENSCAFP00845024050.1, ENSCAFT00845030651.1
- Conserved Domains (5) summary
-
- smart00423
Location:622 → 673
- PSI; domain found in Plexins, Semaphorins and Integrins
- PHA03247
Location:34 → 193
- PHA03247; large tegument protein UL36; Provisional
- cd00096
Location:680 → 685
- Ig; Ig strand A [structural motif]
- cl11960
Location:680 → 759
- Ig; Immunoglobulin domain
- cl15693
Location:195 → 621
- Sema; The Sema domain, a protein interacting module, of semaphorins and plexins
-
XM_038691615.1 → XP_038547543.1 semaphorin-4F isoform X3
- UniProtKB/TrEMBL
- A0A8I3P4M6, A0A8P0T4R6
- Conserved Domains (5) summary
-
- cd11261
Location:195 → 654
- Sema_4F; The Sema domain, a protein interacting module, of semaphorin 4F (Sema4F)
- smart00423
Location:655 → 706
- PSI; domain found in Plexins, Semaphorins and Integrins
- PHA03247
Location:34 → 193
- PHA03247; large tegument protein UL36; Provisional
- cd00096
Location:713 → 718
- Ig; Ig strand A [structural motif]
- cl11960
Location:713 → 792
- Ig; Immunoglobulin domain
-
XM_038691613.1 → XP_038547541.1 semaphorin-4F isoform X1
- UniProtKB/TrEMBL
- A0A8C0NTE4, A0A8C0QBJ9, A0A8I3NZS3
- Related
- ENSCAFP00845023941.1, ENSCAFT00845030521.1
- Conserved Domains (5) summary
-
- cd11261
Location:195 → 654
- Sema_4F; The Sema domain, a protein interacting module, of semaphorin 4F (Sema4F)
- smart00423
Location:655 → 706
- PSI; domain found in Plexins, Semaphorins and Integrins
- PHA03247
Location:34 → 193
- PHA03247; large tegument protein UL36; Provisional
- cd00096
Location:713 → 718
- Ig; Ig strand A [structural motif]
- cl11960
Location:713 → 792
- Ig; Immunoglobulin domain
Alternate UMICH_Zoey_3.1
Genomic
-
NC_049277.1 Alternate UMICH_Zoey_3.1
- Range
-
48355887..48387283 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_038499060.1 → XP_038354988.1 semaphorin-4F isoform X4
- Conserved Domains (4) summary
-
- cd11261
Location:30 → 489
- Sema_4F; The Sema domain, a protein interacting module, of semaphorin 4F (Sema4F)
- smart00423
Location:490 → 541
- PSI; domain found in Plexins, Semaphorins and Integrins
- cd00096
Location:548 → 553
- Ig; Ig strand A [structural motif]
- cl11960
Location:548 → 627
- Ig; Immunoglobulin domain
-
XM_038499058.1 → XP_038354986.1 semaphorin-4F isoform X2
- Conserved Domains (5) summary
-
- smart00423
Location:622 → 673
- PSI; domain found in Plexins, Semaphorins and Integrins
- PHA03247
Location:34 → 193
- PHA03247; large tegument protein UL36; Provisional
- cd00096
Location:680 → 685
- Ig; Ig strand A [structural motif]
- cl11960
Location:680 → 759
- Ig; Immunoglobulin domain
- cl15693
Location:195 → 621
- Sema; The Sema domain, a protein interacting module, of semaphorins and plexins
-
XM_038499059.1 → XP_038354987.1 semaphorin-4F isoform X3
- Conserved Domains (5) summary
-
- cd11261
Location:195 → 654
- Sema_4F; The Sema domain, a protein interacting module, of semaphorin 4F (Sema4F)
- smart00423
Location:655 → 706
- PSI; domain found in Plexins, Semaphorins and Integrins
- PHA03247
Location:34 → 193
- PHA03247; large tegument protein UL36; Provisional
- cd00096
Location:713 → 718
- Ig; Ig strand A [structural motif]
- cl11960
Location:713 → 792
- Ig; Immunoglobulin domain
-
XM_038499057.1 → XP_038354985.1 semaphorin-4F isoform X1
- Conserved Domains (5) summary
-
- cd11261
Location:195 → 654
- Sema_4F; The Sema domain, a protein interacting module, of semaphorin 4F (Sema4F)
- smart00423
Location:655 → 706
- PSI; domain found in Plexins, Semaphorins and Integrins
- PHA03247
Location:34 → 193
- PHA03247; large tegument protein UL36; Provisional
- cd00096
Location:713 → 718
- Ig; Ig strand A [structural motif]
- cl11960
Location:713 → 792
- Ig; Immunoglobulin domain
Alternate UNSW_CanFamBas_1.0
Genomic
-
NC_049758.1 Alternate UNSW_CanFamBas_1.0
- Range
-
48420206..48451735 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_038625689.1 → XP_038481617.1 semaphorin-4F isoform X4
- Conserved Domains (4) summary
-
- cd11261
Location:30 → 489
- Sema_4F; The Sema domain, a protein interacting module, of semaphorin 4F (Sema4F)
- smart00423
Location:490 → 541
- PSI; domain found in Plexins, Semaphorins and Integrins
- cd00096
Location:548 → 553
- Ig; Ig strand A [structural motif]
- cl11960
Location:548 → 627
- Ig; Immunoglobulin domain
-
XM_038625687.1 → XP_038481615.1 semaphorin-4F isoform X2
- Conserved Domains (5) summary
-
- smart00423
Location:622 → 673
- PSI; domain found in Plexins, Semaphorins and Integrins
- PHA03247
Location:34 → 193
- PHA03247; large tegument protein UL36; Provisional
- cd00096
Location:680 → 685
- Ig; Ig strand A [structural motif]
- cl11960
Location:680 → 759
- Ig; Immunoglobulin domain
- cl15693
Location:195 → 621
- Sema; The Sema domain, a protein interacting module, of semaphorins and plexins
-
XM_038625688.1 → XP_038481616.1 semaphorin-4F isoform X3
- Conserved Domains (5) summary
-
- cd11261
Location:195 → 654
- Sema_4F; The Sema domain, a protein interacting module, of semaphorin 4F (Sema4F)
- smart00423
Location:655 → 706
- PSI; domain found in Plexins, Semaphorins and Integrins
- PHA03247
Location:34 → 193
- PHA03247; large tegument protein UL36; Provisional
- cd00096
Location:713 → 718
- Ig; Ig strand A [structural motif]
- cl11960
Location:713 → 792
- Ig; Immunoglobulin domain
-
XM_038625686.1 → XP_038481614.1 semaphorin-4F isoform X1
- Conserved Domains (5) summary
-
- cd11261
Location:195 → 654
- Sema_4F; The Sema domain, a protein interacting module, of semaphorin 4F (Sema4F)
- smart00423
Location:655 → 706
- PSI; domain found in Plexins, Semaphorins and Integrins
- PHA03247
Location:34 → 193
- PHA03247; large tegument protein UL36; Provisional
- cd00096
Location:713 → 718
- Ig; Ig strand A [structural motif]
- cl11960
Location:713 → 792
- Ig; Immunoglobulin domain
Alternate UU_Cfam_GSD_1.0
Genomic
-
NC_049238.1 Alternate UU_Cfam_GSD_1.0
- Range
-
48983164..49014582 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_038561648.1 → XP_038417576.1 semaphorin-4F isoform X4
- UniProtKB/TrEMBL
- A0A8C0QBJ9, A0A8I3NZS3
- Conserved Domains (4) summary
-
- cd11261
Location:30 → 489
- Sema_4F; The Sema domain, a protein interacting module, of semaphorin 4F (Sema4F)
- smart00423
Location:490 → 541
- PSI; domain found in Plexins, Semaphorins and Integrins
- cd00096
Location:548 → 553
- Ig; Ig strand A [structural motif]
- cl11960
Location:548 → 627
- Ig; Immunoglobulin domain
-
XM_038561646.1 → XP_038417574.1 semaphorin-4F isoform X2
- UniProtKB/TrEMBL
- A0A8C0QBD4, A0A8I3P073
- Conserved Domains (5) summary
-
- smart00423
Location:622 → 673
- PSI; domain found in Plexins, Semaphorins and Integrins
- PHA03247
Location:34 → 193
- PHA03247; large tegument protein UL36; Provisional
- cd00096
Location:680 → 685
- Ig; Ig strand A [structural motif]
- cl11960
Location:680 → 759
- Ig; Immunoglobulin domain
- cl15693
Location:195 → 621
- Sema; The Sema domain, a protein interacting module, of semaphorins and plexins
-
XM_038561647.1 → XP_038417575.1 semaphorin-4F isoform X3
- UniProtKB/TrEMBL
- A0A8I3P4M6, A0A8P0T4R6
- Conserved Domains (5) summary
-
- cd11261
Location:195 → 654
- Sema_4F; The Sema domain, a protein interacting module, of semaphorin 4F (Sema4F)
- smart00423
Location:655 → 706
- PSI; domain found in Plexins, Semaphorins and Integrins
- PHA03247
Location:34 → 193
- PHA03247; large tegument protein UL36; Provisional
- cd00096
Location:713 → 718
- Ig; Ig strand A [structural motif]
- cl11960
Location:713 → 792
- Ig; Immunoglobulin domain
-
XM_038561645.1 → XP_038417573.1 semaphorin-4F isoform X1
- UniProtKB/TrEMBL
- A0A8C0NTE4, A0A8C0QBJ9, A0A8I3NZS3
- Conserved Domains (5) summary
-
- cd11261
Location:195 → 654
- Sema_4F; The Sema domain, a protein interacting module, of semaphorin 4F (Sema4F)
- smart00423
Location:655 → 706
- PSI; domain found in Plexins, Semaphorins and Integrins
- PHA03247
Location:34 → 193
- PHA03247; large tegument protein UL36; Provisional
- cd00096
Location:713 → 718
- Ig; Ig strand A [structural motif]
- cl11960
Location:713 → 792
- Ig; Immunoglobulin domain
Alternate Dog10K_Boxer_Tasha Primary Assembly
Genomic
-
NC_006599.4 Alternate Dog10K_Boxer_Tasha Primary Assembly
- Range
-
48121196..48152554 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_022404780.2 → XP_022260488.1 semaphorin-4F isoform X4
- UniProtKB/TrEMBL
- A0A8C0QBJ9, A0A8I3NZS3
- Conserved Domains (4) summary
-
- cd11261
Location:30 → 489
- Sema_4F; The Sema domain, a protein interacting module, of semaphorin 4F (Sema4F)
- smart00423
Location:490 → 541
- PSI; domain found in Plexins, Semaphorins and Integrins
- cd00096
Location:548 → 553
- Ig; Ig strand A [structural motif]
- cl11960
Location:548 → 627
- Ig; Immunoglobulin domain
-
XM_005630511.4 → XP_005630568.3 semaphorin-4F isoform X2
- UniProtKB/TrEMBL
- A0A8C0QBD4, A0A8I3P073
- Conserved Domains (5) summary
-
- smart00423
Location:622 → 673
- PSI; domain found in Plexins, Semaphorins and Integrins
- PHA03247
Location:34 → 193
- PHA03247; large tegument protein UL36; Provisional
- cd00096
Location:680 → 685
- Ig; Ig strand A [structural motif]
- cl11960
Location:680 → 759
- Ig; Immunoglobulin domain
- cl15693
Location:195 → 621
- Sema; The Sema domain, a protein interacting module, of semaphorins and plexins
-
XM_022404779.2 → XP_022260487.2 semaphorin-4F isoform X3
- UniProtKB/TrEMBL
- A0A8I3P4M6, A0A8P0T4R6
- Conserved Domains (5) summary
-
- cd11261
Location:195 → 654
- Sema_4F; The Sema domain, a protein interacting module, of semaphorin 4F (Sema4F)
- smart00423
Location:655 → 706
- PSI; domain found in Plexins, Semaphorins and Integrins
- PHA03247
Location:34 → 193
- PHA03247; large tegument protein UL36; Provisional
- cd00096
Location:713 → 718
- Ig; Ig strand A [structural motif]
- cl11960
Location:713 → 792
- Ig; Immunoglobulin domain
-
XM_540214.7 → XP_540214.5 semaphorin-4F isoform X1
- UniProtKB/TrEMBL
- A0A8C0QBJ9, A0A8I3NZS3
- Conserved Domains (5) summary
-
- cd11261
Location:195 → 654
- Sema_4F; The Sema domain, a protein interacting module, of semaphorin 4F (Sema4F)
- smart00423
Location:655 → 706
- PSI; domain found in Plexins, Semaphorins and Integrins
- PHA03247
Location:34 → 193
- PHA03247; large tegument protein UL36; Provisional
- cd00096
Location:713 → 718
- Ig; Ig strand A [structural motif]
- cl11960
Location:713 → 792
- Ig; Immunoglobulin domain