U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    TLX2 T cell leukemia homeobox 2 [ Canis lupus familiaris (dog) ]

    Gene ID: 483102, updated on 5-Mar-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    TLX2
    Gene description
    T cell leukemia homeobox 2
    See related
    Ensembl:ENSCAFG00845018781
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See TLX2 in Genome Data Viewer
    Location:
    chromosome: 17
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 17 NC_051821.1 (49484463..49486700, complement)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 17 NC_006599.4 (48266914..48269141, complement)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 17 NC_049238.1 (49126036..49128273, complement)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 17 NC_049277.1 (48501609..48503834, complement)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 17 NC_049758.1 (48568353..48570574, complement)

    Chromosome 17 - NC_051821.1Genomic Context describing neighboring genes Neighboring gene AUP1 lipid droplet regulating VLDL assembly factor Neighboring gene DEAQ-box RNA dependent ATPase 1 Neighboring gene polycomb group ring finger 1 Neighboring gene uncharacterized LOC119869720 Neighboring gene ladybird homeobox 2 Neighboring gene tetratricopeptide repeat domain 31 Neighboring gene coiled-coil domain containing 142

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in animal organ development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    T-cell leukemia homeobox protein 2

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051821.1 Reference ROS_Cfam_1.0

      Range
      49484463..49486700 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038691650.1 → XP_038547578.1  T-cell leukemia homeobox protein 2

      UniProtKB/TrEMBL
      A0A8C0KN39, A0A8C0QL02, A0A8I3P8B6
      Related
      ENSCAFP00845025975.1, ENSCAFT00845033179.1
      Conserved Domains (1) summary
      pfam00046
      Location:160 → 214
      Homeobox; Homeobox domain

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049277.1 Alternate UMICH_Zoey_3.1

      Range
      48501609..48503834 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038499093.1 → XP_038355021.1  T-cell leukemia homeobox protein 2

      Conserved Domains (1) summary
      pfam00046
      Location:160 → 214
      Homeobox; Homeobox domain

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049758.1 Alternate UNSW_CanFamBas_1.0

      Range
      48568353..48570574 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038625721.1 → XP_038481649.1  T-cell leukemia homeobox protein 2

      Conserved Domains (1) summary
      pfam00046
      Location:160 → 214
      Homeobox; Homeobox domain

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049238.1 Alternate UU_Cfam_GSD_1.0

      Range
      49126036..49128273 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038561681.1 → XP_038417609.1  T-cell leukemia homeobox protein 2

      UniProtKB/TrEMBL
      A0A8C0KN39, A0A8C0QL02, A0A8I3P8B6
      Conserved Domains (1) summary
      pfam00046
      Location:160 → 214
      Homeobox; Homeobox domain

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006599.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      48266914..48269141 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_849982.5 → XP_855075.2  T-cell leukemia homeobox protein 2

      UniProtKB/TrEMBL
      A0A8C0KN39, A0A8C0QL02, A0A8I3P8B6
      Conserved Domains (1) summary
      pfam00046
      Location:160 → 214
      Homeobox; Homeobox domain
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials