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    APD1 Apd1p [ Saccharomyces cerevisiae S288C ]

    Gene ID: 852448, updated on 1-Aug-2024

    Summary

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    Gene symbol
    APD1
    Gene description
    Apd1p
    Primary source
    FungiDB:YBR151W
    Locus tag
    YBR151W
    See related
    SGD:S000000355; AllianceGenome:SGD:S000000355; VEuPathDB:YBR151W
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Saccharomyces cerevisiae S288C (strain: S288C)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
    Summary
    Located in cytoplasm and nucleus. [provided by Alliance of Genome Resources, Apr 2022]
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    Genomic context

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    See APD1 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    1
    Sequence:
    Chromosome: II; NC_001134.8 (545028..545978)

    Chromosome II - NC_001134.8Genomic Context describing neighboring genes Neighboring gene D-arabinose 1-dehydrogenase (NAD(P)(+)) ARA1 Neighboring gene Tbs1p Neighboring gene U4/U6-U5 snRNP complex subunit SPP381 Neighboring gene 2,5-diamino-6-(ribosylamino)-4(3H)-pyrimidinone 5'-phosphate reductase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_001134.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Apd1 and Aim32 Are Prototypes of Bishistidinyl-Coordinated Non-Rieske [2Fe-2S] Proteins. Stegmaier K, et al. J Am Chem Soc, 2019 Apr 10. PMID 30879301
    2. Loss of APD1 in yeast confers hydroxyurea sensitivity suppressed by Yap1p transcription factor. Tang HM, et al. Sci Rep, 2015 Jan 20. PMID 25600293, Free PMC Article
    3. Functional analysis of 150 deletion mutants in Saccharomyces cerevisiae by a systematic approach. Entian KD, et al. Mol Gen Genet, 1999 Dec. PMID 10628851
    4. Integrating Rio1 activities discloses its nutrient-activated network in Saccharomyces cerevisiae. Iacovella MG, et al. Nucleic Acids Res, 2018 Sep 6. PMID 30011030, Free PMC Article
    5. Yeast Saccharomyces cerevisiae adiponectin receptor homolog Izh2 is involved in the regulation of zinc, phospholipid and pH homeostasis. Mattiazzi Ušaj M, et al. Metallomics, 2015 Sep. PMID 26067383

    See all (18) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by SGD

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm HDA PubMed 
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in cytosol IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in nucleus HDA PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Apd1p
    NP_009709.1
    • 2Fe-2S cytosolic hypothetical protein; bishistidinyl coordinated, non-Rieske [2Fe-2S] cluster containing thiredoxin-like ferredoxin; required for normal localization of actin patches and for normal tolerance of sodium ions and hydrogen peroxide; green fluorescent protein (GFP)-fusion protein localizes to both the nucleus and the cytoplasm; homologous to AIM32

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001134.8 Reference assembly

      Range
      545028..545978
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001178499.1 → NP_009709.1  TPA: Apd1p [Saccharomyces cerevisiae S288C]

      See identical proteins and their annotated locations for NP_009709.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      D6VQE6, P38281
      UniProtKB/TrEMBL
      A6ZL93, B3LN08, C7GUV3, D3UEP5, G2W9F3, N1P899
      Conserved Domains (1) summary
      pfam06999
      Location:70 → 309
      Suc_Fer-like; Sucrase/ferredoxin-like
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P38281.1

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