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    RTK1 putative serine/threonine protein kinase RTK1 [ Saccharomyces cerevisiae S288C ]

    Gene ID: 851536, updated on 18-Sep-2024

    Summary

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    Official Symbol
    RTK1
    Official Full Name
    putative serine/threonine protein kinase RTK1
    Primary source
    SGD:S000002183
    Locus tag
    YDL025C
    See related
    AllianceGenome:SGD:S000002183; FungiDB:YDL025C; VEuPathDB:YDL025C
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Saccharomyces cerevisiae S288C (strain: S288C)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
    Summary
    Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in intracellular signal transduction and protein phosphorylation. Located in cell periphery and cellular bud neck. [provided by Alliance of Genome Resources, Apr 2022]
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    Genomic context

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    See RTK1 in Genome Data Viewer
    Location:
    chromosome: IV
    Exon count:
    1
    Sequence:
    Chromosome: IV; NC_001136.10 (405344..407206, complement)

    Chromosome IV - NC_001136.10Genomic Context describing neighboring genes Neighboring gene serine/threonine/tyrosine protein kinase MPS1 Neighboring gene Mrx9p Neighboring gene putative acid phosphatase DIA3 Neighboring gene uncharacterized protein Neighboring gene tRNA-Ala

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_001136.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Unsupervised clustering of subcellular protein expression patterns in high-throughput microscopy images reveals protein complexes and functional relationships between proteins. Handfield LF, et al. PLoS Comput Biol, 2013. PMID 23785265, Free PMC Article
    2. Manipulating cell flocculation-associated protein kinases in Saccharomyces cerevisiae enables improved stress tolerance and efficient cellulosic ethanol production. Ye PL, et al. Bioresour Technol, 2022 Mar. PMID 35134528
    3. Reduction of the P5A-ATPase Spf1p phosphoenzyme by a Ca2+-dependent phosphatase. Corradi GR, et al. PLoS One, 2020. PMID 32353073, Free PMC Article
    4. Transcriptional activation of the general amino acid permease gene per1 by the histone deacetylase Clr6 Is regulated by Oca2 kinase. Kaufmann I, et al. Mol Cell Biol, 2010 Jul. PMID 20404084, Free PMC Article
    5. A proteomic strategy for gaining insights into protein sumoylation in yeast. Denison C, et al. Mol Cell Proteomics, 2005 Mar. PMID 15542864

    See all (57) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by SGD

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables histone H2AS1 kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables protein kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables protein serine kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables protein serine/threonine kinase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables protein serine/threonine kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables protein serine/threonine kinase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    involved_in chromatin remodeling IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in protein phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cell periphery IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in cellular bud neck IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    putative serine/threonine protein kinase RTK1
    NP_010259.1
    • Putative protein kinase, potentially phosphorylated by Cdc28p; interacts with ribosome biogenesis factors, Cka2, Gus1 and Arc1; protein abundance increases in response to DNA replication stress

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001136.10 Reference assembly

      Range
      405344..407206 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001180084.1 → NP_010259.1  TPA: putative serine/threonine protein kinase RTK1 [Saccharomyces cerevisiae S288C]

      See identical proteins and their annotated locations for NP_010259.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      D6VRW6, Q12100
      UniProtKB/TrEMBL
      A6ZXU5, N1P4C6
      Conserved Domains (1) summary
      cd13994
      Location:308 → 575
      STKc_HAL4_like; Catalytic domain of Fungal Halotolerance protein 4-like Serine/Threonine kinases
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q12100.1

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