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    GPI16 GPI-anchor transamidase subunit GPI16 [ Saccharomyces cerevisiae S288C ]

    Gene ID: 856595, updated on 7-Jul-2024

    Summary

    Gene symbol
    GPI16
    Gene description
    GPI-anchor transamidase subunit GPI16
    Primary source
    FungiDB:YHR188C
    Locus tag
    YHR188C
    See related
    SGD:S000001231; AllianceGenome:SGD:S000001231; VEuPathDB:YHR188C
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Saccharomyces cerevisiae S288C (strain: S288C)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
    Summary
    Involved in attachment of GPI anchor to protein. Is integral component of endoplasmic reticulum membrane. Part of GPI-anchor transamidase complex. Human ortholog(s) of this gene implicated in multiple congenital anomalies-hypotonia-seizures syndrome 3 and paroxysmal nocturnal hemoglobinuria. Orthologous to human PIGT (phosphatidylinositol glycan anchor biosynthesis class T). [provided by Alliance of Genome Resources, Apr 2022]
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    Genomic context

    See GPI16 in Genome Data Viewer
    Location:
    chromosome: VIII
    Exon count:
    1
    Sequence:
    Chromosome: VIII; NC_001140.6 (482005..483837, complement)

    Chromosome VIII - NC_001140.6Genomic Context describing neighboring genes Neighboring gene ubiquitin-binding TORC1 subunit KOG1 Neighboring gene Elongator subunit IKI1 Neighboring gene aminoacyl-tRNA hydrolase Neighboring gene bifunctional farnesyl-diphosphate farnesyltransferase/squalene synthase

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by SGD

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in GPI anchor biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in attachment of GPI anchor to protein IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in attachment of GPI anchor to protein IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in attachment of GPI anchor to protein IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    part_of GPI-anchor transamidase complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of GPI-anchor transamidase complex IDA
    Inferred from Direct Assay
    more info
    PubMed 
    part_of GPI-anchor transamidase complex IEA
    Inferred from Electronic Annotation
    more info
     
    located_in endoplasmic reticulum HDA PubMed 
    located_in endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
     
    located_in endoplasmic reticulum membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in endoplasmic reticulum membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    GPI-anchor transamidase subunit GPI16
    NP_012058.1
    • Subunit of the glycosylphosphatidylinositol transamidase complex; involved in the addition of GPIs to newly synthesized proteins; luminally-oriented, type I integral membrane glycoprotein of the ER; human PIG-T homolog

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001140.6 Reference assembly

      Range
      482005..483837 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001179319.1NP_012058.1  TPA: GPI-anchor transamidase subunit GPI16 [Saccharomyces cerevisiae S288C]

      See identical proteins and their annotated locations for NP_012058.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      D3DLD6, P38875
      UniProtKB/TrEMBL
      A0A8H4C1K0, A6ZT94, B3LSU9, C7GRL0, C8Z9Y7
      Conserved Domains (1) summary
      pfam04113
      Location:35589
      Gpi16; Gpi16 subunit, GPI transamidase component