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    TMA10 [ Saccharomyces cerevisiae S288C ]

    Gene ID: 851037, updated on 22-Aug-2024

    Summary

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    Official Symbol
    TMA10
    Primary source
    FungiDB:YLR327C
    Locus tag
    YLR327C
    See related
    SGD:S000004319; AllianceGenome:SGD:S000004319; VEuPathDB:YLR327C
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Saccharomyces cerevisiae S288C (strain: S288C)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
    Also known as
    SFL2
    Summary
    Predicted to be located in mitochondrion. [provided by Alliance of Genome Resources, Apr 2022]
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    Genomic context

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    Location:
    chromosome: XII
    Exon count:
    1
    Sequence:
    Chromosome: XII; NC_001144.5 (783127..783387, complement)

    Chromosome XII - NC_001144.5Genomic Context describing neighboring genes Neighboring gene ribosomal 60S subunit protein L38 Neighboring gene uncharacterized protein Neighboring gene tRNA-Ser Neighboring gene nicotinamide-nucleotide adenylyltransferase NMA1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_001144.5

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Formation of the yeast F1F0-ATP synthase dimeric complex does not require the ATPase inhibitor protein, Inh1. Dienhart M, et al. J Biol Chem, 2002 Oct 18. PMID 12167646
    2. Piezophysiology of genome wide gene expression levels in the yeast Saccharomyces cerevisiae. Iwahashi H, et al. Extremophiles, 2003 Aug. PMID 12910389
    3. The ribosome quality control factor Asc1 determines the fate of HSP70 mRNA on and off the ribosome. Alagar Boopathy LR, et al. Nucleic Acids Res, 2023 Jul 7. PMID 37158240, Free PMC Article
    4. DBP7 and YRF1-6 Are Involved in Cell Sensitivity to LiCl by Regulating the Translation of PGM2 mRNA. Jagadeesan SK, et al. Int J Mol Sci, 2023 Jan 16. PMID 36675300, Free PMC Article
    5. Systematic identification and functional screens of uncharacterized proteins associated with eukaryotic ribosomal complexes. Fleischer TC, et al. Genes Dev, 2006 May 15. PMID 16702403, Free PMC Article

    See all (23) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by SGD

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cytoplasm HDA PubMed 
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Tma10p
    NP_013431.1
    • hypothetical protein that associates with ribosomes; protein abundance increases in response to DNA replication stress; TMA10 has a paralog, STF2, that arose from the whole genome duplication

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001144.5 Reference assembly

      Range
      783127..783387 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001182216.1 → NP_013431.1  TPA: Tma10p [Saccharomyces cerevisiae S288C]

      See identical proteins and their annotated locations for NP_013431.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      D6VYW9, Q06177
      UniProtKB/TrEMBL
      A7A1L0, B3RHK2, C7GUA8, C8ZDT8, G2WJE8, N1NYM1
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q06177.3

    Gene LinkOut

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