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    RIM9 Rim9p [ Saccharomyces cerevisiae S288C ]

    Gene ID: 855085, updated on 28-Oct-2024

    Summary

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    Official Symbol
    RIM9
    Official Full Name
    Rim9p
    Primary source
    SGD:S000004667
    Locus tag
    YMR063W
    See related
    AllianceGenome:SGD:S000004667; FungiDB:YMR063W; VEuPathDB:YMR063W
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Saccharomyces cerevisiae S288C (strain: S288C)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
    Summary
    Involved in ascospore formation. Located in fungal-type vacuole lumen and plasma membrane. [provided by Alliance of Genome Resources, Oct 2024]
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    Genomic context

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    See RIM9 in Genome Data Viewer
    Location:
    chromosome: XIII
    Exon count:
    1
    Sequence:
    Chromosome: XIII; NC_001145.3 (397077..397796)

    Chromosome XIII - NC_001145.3Genomic Context describing neighboring genes Neighboring gene cleavage polyadenylation factor subunit RNA14 Neighboring gene glutamate N-acetyltransferase Neighboring gene Aep1p Neighboring gene Kar5p

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_001145.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Putative membrane components of signal transduction pathways for ambient pH regulation in Aspergillus and meiosis in saccharomyces are homologous. Denison SH, et al. Mol Microbiol, 1998 Oct. PMID 9791171
    2. Proteolytic activation of Rim1p, a positive regulator of yeast sporulation and invasive growth. Li W, et al. Genetics, 1997 Jan. PMID 9017390, Free PMC Article
    3. Membrane protein Rim21 plays a central role in sensing ambient pH in Saccharomyces cerevisiae. Obara K, et al. J Biol Chem, 2012 Nov 9. PMID 23019326, Free PMC Article
    4. The Sur7/PalI family transmembrane protein Tos7 (Yol019w) plays a role in secretion in budding yeast. Zhu J, et al. Fungal Genet Biol, 2020 Nov. PMID 33002606
    5. The pH-sensing Rim101 pathway positively regulates the transcriptional expression of the calcium pump gene PMR1 to affect calcium sensitivity in budding yeast. Yan H, et al. Biochem Biophys Res Commun, 2020 Nov 12. PMID 32891431

    See all (46) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by SGD

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in ascospore formation IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    is_active_in cell division site IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in fungal-type vacuole lumen IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    is_active_in growing cell tip IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Rim9p
    NP_013779.1
    • Plasma membrane hypothetical protein; involved in the proteolytic activation of Rim101p in response to alkaline pH; interacts with Rim21p and Dfg16p to form a pH-sensing complex in the Rim101 pathway and is required to maintain Rim21p levels; has similarity to A. nidulans PalI

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001145.3 Reference assembly

      Range
      397077..397796
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001182561.1 → NP_013779.1  TPA: Rim9p [Saccharomyces cerevisiae S288C]

      See identical proteins and their annotated locations for NP_013779.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      D6VZN7, Q04734
      UniProtKB/TrEMBL
      C8ZER5, G2WKB1
      Conserved Domains (1) summary
      pfam06687
      Location:7 → 169
      SUR7; SUR7/PalI family
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q04734.1

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