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    uncharacterized protein [ Saccharomyces cerevisiae S288C ]

    Gene ID: 855115, updated on 28-Oct-2024

    Summary

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    Official Full Name
    uncharacterized protein
    Primary source
    SGD:S000004696
    Locus tag
    YMR090W
    See related
    AllianceGenome:SGD:S000004696; FungiDB:YMR090W; VEuPathDB:YMR090W
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Saccharomyces cerevisiae S288C (strain: S288C)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
    Summary
    Located in cytoplasm. [provided by Alliance of Genome Resources, Oct 2024]
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    Genomic context

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    Location:
    chromosome: XIII
    Exon count:
    1
    Sequence:
    Chromosome: XIII; NC_001145.3 (449245..449928)

    Chromosome XIII - NC_001145.3Genomic Context describing neighboring genes Neighboring gene Vba1p Neighboring gene m-AAA protease subunit YTA12 Neighboring gene Npl6p Neighboring gene Aip1p

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_001145.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Insights into yeast adaptive response to the agricultural fungicide mancozeb: a toxicoproteomics approach. Santos PM, et al. Proteomics, 2009 Feb. PMID 19137554
    2. Functional profiling of the Saccharomyces cerevisiae genome. Giaever G, et al. Nature, 2002 Jul 25. PMID 12140549
    3. The nucleotide sequence of Saccharomyces cerevisiae chromosome XIII. Bowman S, et al. Nature, 1997 May 29. PMID 9169872
    4. An APEX2-based proximity-dependent biotinylation assay with temporal specificity to study protein interactions during autophagy in the yeast Saccharomyces cerevisiae. Filali-Mouncef Y, et al. Autophagy, 2024 Oct. PMID 38958087, Free PMC Article
    5. La-motif-dependent mRNA association with Slf1 promotes copper detoxification in yeast. Schenk L, et al. RNA, 2012 Mar. PMID 22271760, Free PMC Article

    See all (14) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by SGD

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm HDA PubMed 
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    NP_013808.1
    • hypothetical protein; similar to DTDP-glucose 4,6-dehydratases; GFP-fusion protein localizes to the cytoplasm; up-regulated in response to the fungicide mancozeb; not essential for viability

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001145.3 Reference assembly

      Range
      449245..449928
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001182590.1 → NP_013808.1  TPA: uncharacterized protein YMR090W [Saccharomyces cerevisiae S288C]

      See identical proteins and their annotated locations for NP_013808.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      D6VZR3, Q04304
      UniProtKB/TrEMBL
      A6ZME7, B3LLY1, B5VPL6, C7GL36, C8ZEU3, G2WKD8, N1P5H9
      Conserved Domains (1) summary
      cd05243
      Location:5 → 217
      SDR_a5; atypical (a) SDRs, subgroup 5
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q04304.1

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