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    IRC23 Irc23p [ Saccharomyces cerevisiae S288C ]

    Gene ID: 854209, updated on 28-Oct-2024

    Summary

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    Official Symbol
    IRC23
    Official Full Name
    Irc23p
    Primary source
    SGD:S000005570
    Locus tag
    YOR044W
    See related
    AllianceGenome:SGD:S000005570; FungiDB:YOR044W; VEuPathDB:YOR044W
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Saccharomyces cerevisiae S288C (strain: S288C)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
    Summary
    Located in endoplasmic reticulum. [provided by Alliance of Genome Resources, Oct 2024]
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    Genomic context

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    See IRC23 in Genome Data Viewer
    Location:
    chromosome: XV
    Exon count:
    1
    Sequence:
    Chromosome: XV; NC_001147.6 (413007..413480)

    Chromosome XV - NC_001147.6Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene Whi2p Neighboring gene Tom6p Neighboring gene ATP-dependent RNA helicase DBP5

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_001147.6

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. BSC2 induces multidrug resistance via contributing to the formation of biofilm in Saccharomyces cerevisiae. Huang Z, et al. Cell Microbiol, 2021 Dec. PMID 34482605
    2. Genome-wide analysis of Rad52 foci reveals diverse mechanisms impacting recombination. Alvaro D, et al. PLoS Genet, 2007 Dec. PMID 18085829, Free PMC Article
    3. A nuclear role for the DEAD-box protein Dbp5 in tRNA export. Lari A, et al. Elife, 2019 Aug 27. PMID 31453808, Free PMC Article
    4. Utilising established SDL-screening methods as a tool for the functional genomic characterisation of model and non-model organisms. Usher J, et al. FEMS Yeast Res, 2015 Dec. PMID 26472754
    5. Comprehensive and quantitative mapping of RNA-protein interactions across a transcribed eukaryotic genome. She R, et al. Proc Natl Acad Sci U S A, 2017 Apr 4. PMID 28325876, Free PMC Article

    See all (24) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by SGD

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in endoplasmic reticulum HDA PubMed 
    located_in endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in endoplasmic reticulum membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Irc23p
    NP_014687.1
    • hypothetical protein involved in multidrug resistance; green fluorescent protein (GFP)-fusion localizes to the ER; null mutant displays increased levels of spontaneous Rad52p foci; IRC23 has a paralog, BSC2, that arose from the whole genome duplication

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001147.6 Reference assembly

      Range
      413007..413480
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001183463.1 → NP_014687.1  TPA: Irc23p [Saccharomyces cerevisiae S288C]

      See identical proteins and their annotated locations for NP_014687.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      D6W2B0, Q08416
      UniProtKB/TrEMBL
      A6ZNP9, B3LJ96, C7GLH2, C8ZI06, G2WMS5
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q08416.1

    Gene LinkOut

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