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    Kctd8 potassium channel tetramerisation domain containing 8 [ Mus musculus (house mouse) ]

    Gene ID: 243043, updated on 28-Oct-2024

    Summary

    Official Symbol
    Kctd8provided by MGI
    Official Full Name
    potassium channel tetramerisation domain containing 8provided by MGI
    Primary source
    MGI:MGI:2443804
    See related
    Ensembl:ENSMUSG00000037653 AllianceGenome:MGI:2443804
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    A730087N02Rik
    Summary
    Predicted to enable G protein-coupled neurotransmitter receptor activity involved in regulation of presynaptic membrane potential. Acts upstream of or within regulation of G protein-coupled receptor signaling pathway. Part of receptor complex. Is active in postsynapse and presynaptic active zone membrane. Is expressed in central nervous system; dorsal root ganglion; and neural retina. Orthologous to human KCTD8 (potassium channel tetramerization domain containing 8). [provided by Alliance of Genome Resources, Oct 2024]
    Expression
    Biased expression in cerebellum adult (RPKM 7.0), CNS E18 (RPKM 4.5) and 8 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See Kctd8 in Genome Data Viewer
    Location:
    5 C3.1; 5 37.01 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 5 NC_000071.7 (69266628..69499052, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 5 NC_000071.6 (69109285..69341709, complement)

    Chromosome 5 - NC_000071.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 23605 Neighboring gene STARR-seq mESC enhancer starr_13334 Neighboring gene STARR-seq mESC enhancer starr_13335 Neighboring gene predicted gene, 35703 Neighboring gene STARR-seq mESC enhancer starr_13336 Neighboring gene STARR-seq mESC enhancer starr_13337 Neighboring gene predicted gene, 23932 Neighboring gene predicted gene 5867

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Component Evidence Code Pubs
    located_in cell projection IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in postsynapse IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in postsynaptic membrane IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in presynaptic active zone membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    is_active_in presynaptic membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    part_of receptor complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of receptor complex IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    BTB/POZ domain-containing protein KCTD8

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_175519.5NP_780728.3  BTB/POZ domain-containing protein KCTD8

      See identical proteins and their annotated locations for NP_780728.3

      Status: VALIDATED

      Source sequence(s)
      AK047519, AY615967
      Consensus CDS
      CCDS19320.1
      UniProtKB/Swiss-Prot
      Q50H33, Q8BR74, Q8C4C2, Q8C906, Q8C9B0, Q8CAA9
      Related
      ENSMUSP00000055326.5, ENSMUST00000054095.6
      Conserved Domains (2) summary
      smart00225
      Location:46145
      BTB; Broad-Complex, Tramtrack and Bric a brac
      cl02518
      Location:46142
      BTB; BTB/POZ domain

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000071.7 Reference GRCm39 C57BL/6J

      Range
      69266628..69499052 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)