Smgc submandibular gland protein C [Rattus norvegicus (Norway rat)] - Gene

Summary

Official Symbol: Smgcprovided by RGD
Official Full Name: submandibular gland protein Cprovided by RGD
Primary source: RGD:1302995
See related: EnsemblRapid:ENSRNOG00000054624 AllianceGenome:RGD:1302995
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Rattus norvegicus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary: Predicted to be located in extracellular region. [provided by Alliance of Genome Resources, Nov 2024]
Expression: Biased expression in Testes (RPKM 2.0), Heart (RPKM 1.2) and 2 other tissues See more
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Genomic context

Location:: 7q35

Exon count:: 17

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCr8 (GCF_036323735.1)	7	NC_086025.1 (124897424..124927730)
RS_2023_06	previous assembly	mRatBN7.2 (GCF_015227675.2)	7	NC_051342.1 (123017896..123048211)
106	previous assembly	Rnor_6.0 (GCF_000001895.5)	7	NC_005106.4 (133048727..133078154)

Chromosome 7 - NC_086025.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
BioProject: PRJNA238328
Publication: PMID 24510058
Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

SMGC is expressed in the submandibular gland at high levels through postnatal day 20, and secreted SMGC visualized by SDS-PAGE and silver staining is 89 kDa; localized on rat chromosome 7q34-35
Title: Molecular cloning and characterization of the neonatal rat and mouse submandibular gland protein SMGC.

Submit: New GeneRIF Correction

General gene information

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Gene Ontology Provided by RGD

Component	Evidence Code	Pubs
located_in extracellular region	TAS Traceable Author Statement more info	PubMed

General protein information

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Preferred Names: submandibular gland protein C

Names: neonatal submandibular gland protein C

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.