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    LOC102546547 uncharacterized LOC102546547 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 102546547, updated on 17-Aug-2024

    Summary

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    Symbol
    LOC102546547provided by RGD
    Full Name
    uncharacterized LOC102546547provided by RGD
    Primary source
    RGD:7663361
    See related
    AllianceGenome:RGD:7663361
    Gene type
    ncRNA
    RefSeq status
    MODEL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Expression
    Biased expression in Spleen (RPKM 19.0), Kidney (RPKM 16.2) and 9 other tissues See more
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    Genomic context

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    See LOC102546547 in Genome Data Viewer
    Location:
    8q24
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 8 NC_086026.1 (72197228..72198882, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 8 NC_051343.1 (63301811..63304098, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 8 NC_005107.4 (67731620..67734808, complement)

    Chromosome 8 - NC_086026.1Genomic Context describing neighboring genes Neighboring gene integrin subunit alpha 11 Neighboring gene uncharacterized LOC120094183 Neighboring gene fem-1 homolog B Neighboring gene CLN6, transmembrane ER protein Neighboring gene calmodulin-like 4 Neighboring gene protein inhibitor of activated STAT, 1 Neighboring gene uncharacterized LOC134480067

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    Bibliography

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    GeneRIFs: Gene References Into Functions

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086026.1 Reference GRCr8

      Range
      72197228..72198882 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_356380.4 RNA Sequence

    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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