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    srp14 [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 2542565, updated on 22-Aug-2024

    Summary

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    Official Symbol
    srp14
    Primary source
    PomBase:SPAC19B12.09
    Locus tag
    SPOM_SPAC19B12.09
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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    Genomic context

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    Location:
    chromosome: I
    Exon count:
    3
    Sequence:
    Chromosome: I; NC_003424.3 (4900527..4901134)

    Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene zinc finger protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Atg8 deconjugator Atg4 Neighboring gene AMSH-like ubiquitin-specific protease Neighboring gene ncRNA Neighboring gene zinc finger ribosome biogenesis protein Neighboring gene SMN complex subunit Yip11/Gem2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003424.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Structure of SRP14 from the Schizosaccharomyces pombe signal recognition particle. Brooks MA, et al. Acta Crystallogr D Biol Crystallogr, 2009 May. PMID 19390147
    2. Chromatin remodeller Fun30(Fft3) induces nucleosome disassembly to facilitate RNA polymerase II elongation. Lee J, et al. Nat Commun, 2017 Feb 20. PMID 28218250, Free PMC Article
    3. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372
    4. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360
    5. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    enables 7S RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables endoplasmic reticulum signal peptide binding IC
    Inferred by Curator
    more info
    		  
    Process Evidence Code Pubs
    involved_in SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition ISO
    Inferred from Sequence Orthology
    more info
    		  
    involved_in intracellular protein transport NAS
    Non-traceable Author Statement
    more info
    		  
    involved_in protein targeting to ER IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    is_active_in nucleolus HDA PubMed 
    is_active_in nucleus HDA PubMed 
    part_of signal recognition particle, endoplasmic reticulum targeting IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    signal recognition particle subunit Srp14

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003424.3 Reference assembly

      Range
      4900527..4901134
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001020199.3 → NP_594772.1  signal recognition particle subunit Srp14 [Schizosaccharomyces pombe]

      See identical proteins and their annotated locations for NP_594772.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      Q9P372
      Conserved Domains (1) summary
      pfam02290
      Location:3 → 85
      SRP14; Signal recognition particle 14kD protein
    Nucleotide Protein
    Heading Accession and Version

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