T20B12.3 Uncharacterized protein [Caenorhabditis elegans] - Gene

Summary

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Official Symbol: T20B12.3
Official Full Name: Uncharacterized protein
Primary source: WormBase:WBGene00020601
Locus tag: CELE_T20B12.3
See related: AllianceGenome:WB:WBGene00020601
Gene type: protein coding
RefSeq status: REVIEWED
Organism: Caenorhabditis elegans (strain: Bristol N2)
Lineage: Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary: Predicted to be involved in ribosome biogenesis. Predicted to be located in intracellular membrane-bounded organelle. Predicted to be part of Noc4p-Nop14p complex and small-subunit processome. Predicted to be active in nucleolus. Orthologous to human NOC4L (nucleolar complex associated 4 homolog). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See T20B12.3 in Genome Data Viewer

Location:: chromosome: III

Exon count:: 5

Sequence:: Chromosome: III; NC_003281.10 (7382115..7383905)

Chromosome III - NC_003281.10 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:: NC_003281.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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Pathways from PubChem

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Interactions

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Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

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Markers

T20B12.3 (e-PCR)
- UniSTS:306282

Homology

Orthologs from OrthoDB

Gene Ontology Provided by WormBase

Process	Evidence Code	Pubs
involved_in ribosome biogenesis	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
part_of Noc4p-Nop14p complex	IBA Inferred from Biological aspect of Ancestor more info
located_in intracellular membrane-bounded organelle	IEA Inferred from Electronic Annotation more info
is_active_in nucleolus	IBA Inferred from Biological aspect of Ancestor more info
part_of small-subunit processome	IBA Inferred from Biological aspect of Ancestor more info

General protein information

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Preferred Names: Uncharacterized protein

NP_498634.1

Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

NC_003281.10 Reference assembly

Range

7382115..7383905

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

NM_066233.6 → NP_498634.1 Uncharacterized protein CELE_T20B12.3 [Caenorhabditis elegans]

See identical proteins and their annotated locations for NP_498634.1

Status: REVIEWED

UniProtKB/Swiss-Prot

P41843

Conserved Domains (2) summary

pfam03914
Location:247 → 395

CBF; CBF/Mak21 family

cl00912
Location:154 → 251

MmgE_PrpD; MmgE/PrpD family