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    nam9 mitochondrial 37S ribosomal protein uS4m [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 2540056, updated on 22-Jun-2024

    Summary

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    Gene symbol
    nam9
    Gene description
    mitochondrial 37S ribosomal protein uS4m
    Locus tag
    SPOM_SPBC13G1.01C
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
    Old locus tag
    SPBC13G1.01c
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    Genomic context

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    See nam9 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    2
    Sequence:
    Chromosome: II; NC_003423.3 (3728195..3729349, complement)

    Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene RNA helicase Neighboring gene putative RNA-binding protein Neighboring gene ncRNA Neighboring gene mannose-1-phosphate guanyltransferase Neighboring gene ncRNA Neighboring gene protein Pex14

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003423.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Transcription and chromatin-based surveillance mechanism controls suppression of cryptic antisense transcription. Heo DH, et al. Cell Rep, 2021 Sep 7. PMID 34496258, Free PMC Article
    2. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372
    3. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360
    4. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    enables rRNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables structural constituent of ribosome IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    involved_in mitochondrial translation ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    involved_in ribosomal small subunit biogenesis IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    part_of mitochondrial small ribosomal subunit IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    is_active_in mitochondrion HDA PubMed 

    General protein information

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    Preferred Names
    mitochondrial 37S ribosomal protein uS4m

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003423.3 Reference assembly

      Range
      3728195..3729349 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001022471.3 → NP_596550.1  mitochondrial 37S ribosomal protein uS4m [Schizosaccharomyces pombe]

      See identical proteins and their annotated locations for NP_596550.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      O60063, P78902
      Conserved Domains (2) summary
      smart00363
      Location:96 → 150
      S4; S4 RNA-binding domain
      COG0522
      Location:1 → 264
      RpsD; Ribosomal protein S4 or related protein [Translation, ribosomal structure and biogenesis]
    Nucleotide Protein
    Heading Accession and Version

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