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    byr1 MAP kinase kinase Byr1 [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 2542137, updated on 18-Sep-2024

    Summary

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    Official Symbol
    byr1
    Official Full Name
    MAP kinase kinase Byr1
    Primary source
    PomBase:SPAC1D4.13
    Locus tag
    SPOM_SPAC1D4.13
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
    Also known as
    ste1; ste3
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    Genomic context

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    See byr1 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    1
    Sequence:
    Chromosome: I; NC_003424.3 (668004..669742)

    Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene transcription factor TFIIH complex subunit Rad15 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene THO complex subunit Tho2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003424.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A TOR (target of rapamycin) and nutritional phosphoproteome of fission yeast reveals novel targets in networks conserved in humans. Halova L, et al. Open Biol, 2021 Apr. PMID 33823663, Free PMC Article
    2. Schizosaccharomyces pombe Spk1 is a tyrosine-phosphorylated protein functionally related to Xenopus mitogen-activated protein kinase. Gotoh Y, et al. Mol Cell Biol, 1993 Oct. PMID 8413241, Free PMC Article
    3. A gene which encodes a predicted protein kinase can restore some functions of the ras gene in fission yeast. Nadin-Davis SA, et al. EMBO J, 1988 Apr. PMID 3042386, Free PMC Article
    4. Bob1, a Gim5/MM-1/Pfd5 homolog, interacts with the MAP kinase kinase Byr1 to regulate sexual differentiation in the fission yeast, Schizosaccharomyces pombe. Henkel J, et al. Differentiation, 2001 Jun. PMID 11683500
    5. A gene encoding a protein with seven zinc finger domains acts on the sexual differentiation pathways of Schizosaccharomyces pombe. Xu HP, et al. Mol Biol Cell, 1992 Jul. PMID 1515675, Free PMC Article

    See all (23) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables MAP kinase kinase activity EXP
    Inferred from Experiment
    more info
    		 PubMed 
    enables MAP kinase kinase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables MAP kinase kinase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables MAP kinase kinase activity IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in MAPK cascade IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in conjugation with cellular fusion IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in pheromone response MAPK cascade IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in regulation of ascospore formation IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    is_active_in cell division site IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    is_active_in cell tip IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    is_active_in cytosol HDA PubMed 
    is_active_in nucleus HDA PubMed 

    General protein information

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    Preferred Names
    MAP kinase kinase Byr1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003424.3 Reference assembly

      Range
      668004..669742
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001018425.3 → NP_593026.1  MAP kinase kinase Byr1 [Schizosaccharomyces pombe]

      See identical proteins and their annotated locations for NP_593026.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      P10506
      Conserved Domains (2) summary
      cd06620
      Location:60 → 334
      PKc_Byr1_like; Catalytic domain of fungal Byr1-like dual-specificity Mitogen-activated protein Kinase Kinases
      pfam00069
      Location:66 → 320
      Pkinase; Protein kinase domain
    Nucleotide Protein
    Heading Accession and Version

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