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    tre1 Transferrin receptor-like protease Tre1 [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 2540952, updated on 18-Sep-2024

    Summary

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    Official Symbol
    tre1
    Official Full Name
    Transferrin receptor-like protease Tre1
    Primary source
    PomBase:SPBC354.09c
    Locus tag
    SPOM_SPBC354.09C
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
    Also known as
    ppp59
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    Genomic context

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    See tre1 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    1
    Sequence:
    Chromosome: II; NC_003423.3 (565094..568389, complement)

    Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Ca(2+) transporter Rsn1 Neighboring gene ncRNA Neighboring gene 5S ribosomal RNA Neighboring gene tRNA-Gly

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003423.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Systematic screen for mutants resistant to TORC1 inhibition in fission yeast reveals genes involved in cellular ageing and growth. Rallis C, et al. Biol Open, 2014 Feb 15. PMID 24463365, Free PMC Article
    2. Phosphorylation of the RNA-binding protein Zfs1 modulates sexual differentiation in fission yeast. Navarro FJ, et al. J Cell Sci, 2017 Dec 15. PMID 29084823, Free PMC Article
    3. High-Throughput Identification of Nuclear Envelope Protein Interactions in Schizosaccharomyces pombe Using an Arrayed Membrane Yeast-Two Hybrid Library. Varberg JM, et al. G3 (Bethesda), 2020 Dec 3. PMID 33109728, Free PMC Article
    4. Conservation and rewiring of functional modules revealed by an epistasis map in fission yeast. Roguev A, et al. Science, 2008 Oct 17. PMID 18818364, Free PMC Article
    5. Hierarchical modularity and the evolution of genetic interactomes across species. Ryan CJ, et al. Mol Cell, 2012 Jun 8. PMID 22681890, Free PMC Article

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    enables carboxypeptidase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    involved_in protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway ISO
    Inferred from Sequence Orthology
    more info
    		  
    Component Evidence Code Pubs
    is_active_in fungal-type vacuole membrane IC
    Inferred by Curator
    more info
    		  

    General protein information

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    Preferred Names
    Transferrin receptor-like protease Tre1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003423.3 Reference assembly

      Range
      565094..568389 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001021139.3 → NP_595233.1  Transferrin receptor-like protease Tre1 [Schizosaccharomyces pombe]

      See identical proteins and their annotated locations for NP_595233.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      O43023
      Conserved Domains (4) summary
      cd03874
      Location:424 → 644
      M28_PMSA_TfR_like; M28 Zn-peptidase Transferrin Receptor-like family
      pfam04253
      Location:675 → 792
      TFR_dimer; Transferrin receptor-like dimerization domain
      cl10459
      Location:197 → 416
      Peptidases_S8_S53; Peptidase domain in the S8 and S53 families
      cl14876
      Location:139 → 191
      Zinc_peptidase_like; Zinc peptidases M18, M20, M28, and M42
    Nucleotide Protein
    Heading Accession and Version

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