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    yml6 mitochondrial 54S ribosomal protein uL4m [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 2540449, updated on 18-Sep-2024

    Summary

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    Official Symbol
    yml6
    Official Full Name
    mitochondrial 54S ribosomal protein uL4m
    Primary source
    PomBase:SPBC2D10.08c
    Locus tag
    SPOM_SPBC2D10.08C
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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    Genomic context

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    See yml6 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    1
    Sequence:
    Chromosome: II; NC_003423.3 (2979661..2980469, complement)

    Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene MBF transcription factor activator Rep1 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene endopeptidase catalytic subunit Neighboring gene ncRNA Neighboring gene mitochondrial 37S ribosomal protein mS47 Neighboring gene fibrillarin, rRNA and histone methyltransferase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003423.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. SR protein kinases promote splicing of nonconsensus introns. Lipp JJ, et al. Nat Struct Mol Biol, 2015 Aug. PMID 26167880
    2. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372
    3. Transcription and RNA-processing in fission yeast mitochondria. Schäfer B, et al. RNA, 2005 May. PMID 15811919, Free PMC Article
    4. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360
    5. The mitochondrial genome of the fission yeast Schizosaccharomyces pombe: highly homologous introns are inserted at the same position of the otherwise less conserved cox1 genes in Schizosaccharomyces pombe and Aspergillus nidulans. Lang BF. EMBO J, 1984 Sep. PMID 6092057, Free PMC Article

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    enables structural constituent of ribosome IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    involved_in mitochondrial translation ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Component Evidence Code Pubs
    part_of mitochondrial large ribosomal subunit ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    is_active_in mitochondrion HDA PubMed 

    General protein information

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    Preferred Names
    mitochondrial 54S ribosomal protein uL4m

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003423.3 Reference assembly

      Range
      2979661..2980469 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001022147.2 → NP_596227.1  mitochondrial 54S ribosomal protein uL4m [Schizosaccharomyces pombe]

      See identical proteins and their annotated locations for NP_596227.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      O74801
      Conserved Domains (1) summary
      COG0088
      Location:28 → 227
      RplD; Ribosomal protein L4 [Translation, ribosomal structure and biogenesis]
    Nucleotide Protein
    Heading Accession and Version

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