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    rmn1 [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 2541281, updated on 11-Sep-2024

    Summary

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    Official Symbol
    rmn1
    Primary source
    PomBase:SPBC902.04
    Locus tag
    SPOM_SPBC902.04
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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    Genomic context

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    Location:
    chromosome: II
    Exon count:
    4
    Sequence:
    Chromosome: II; NC_003423.3 (489856..492221)

    Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene protein phosphatase regulator Nem2 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene isocitrate dehydrogenase (NAD+) subunit 2 Neighboring gene ncRNA Neighboring gene gamma tubulin complex linker Mto2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003423.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Isolation of a novel rmn1 gene genetically linked to spnab2 with respect to mRNA export in fission yeast. Cho YS, et al. Mol Cells, 2012 Sep. PMID 22936388, Free PMC Article
    2. Chromosome-associated RNA-protein complexes promote pairing of homologous chromosomes during meiosis in Schizosaccharomyces pombe. Ding DQ, et al. Nat Commun, 2019 Dec 6. PMID 31811152, Free PMC Article
    3. Ubiquitination-dependent control of sexual differentiation in fission yeast. Simonetti F, et al. Elife, 2017 Aug 25. PMID 28841135, Free PMC Article
    4. The fission yeast MTREC complex targets CUTs and unspliced pre-mRNAs to the nuclear exosome. Zhou Y, et al. Nat Commun, 2015 May 20. PMID 25989903, Free PMC Article
    5. Mtr4-like protein coordinates nuclear RNA processing for heterochromatin assembly and for telomere maintenance. Lee NN, et al. Cell, 2013 Nov 21. PMID 24210919, Free PMC Article

    See all (17) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    enables RNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    involved_in nuclear polyadenylation-dependent CUT catabolic process NAS
    Non-traceable Author Statement
    more info
    		  
    Component Evidence Code Pubs
    part_of MTREC complex IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    part_of Mei2 nuclear dot complex IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    part_of chromatin IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    is_active_in nuclear body IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    is_active_in nucleus HDA PubMed 
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    is_active_in nucleus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    MTREC (exosome adaptor) complex RNA-binding subunit Rmn1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003423.3 Reference assembly

      Range
      489856..492221
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001021108.3 → NP_595202.1  MTREC (exosome adaptor) complex RNA-binding subunit Rmn1 [Schizosaccharomyces pombe]

      See identical proteins and their annotated locations for NP_595202.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      Q9USP9, Q9UU06
      Conserved Domains (3) summary
      cd12257
      Location:241 → 312
      RRM1_RBM26_like; RNA recognition motif 1 in vertebrate RNA-binding protein 26 (RBM26) and similar proteins
      pfam14303
      Location:299 → 432
      NAM-associated; No apical meristem-associated C-terminal domain
      cl02562
      Location:12 → 75
      PWI; PWI domain
    Nucleotide Protein
    Heading Accession and Version

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