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    rtt109 histone lysine acetyltransferase Rtt109 [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 2540945, updated on 18-Sep-2024

    Summary

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    Official Symbol
    rtt109
    Official Full Name
    histone lysine acetyltransferase Rtt109
    Primary source
    PomBase:SPBC342.06c
    Locus tag
    SPOM_SPBC342.06C
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
    Also known as
    kat11
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    Genomic context

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    See rtt109 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    1
    Sequence:
    Chromosome: II; NC_003423.3 (4213486..4214761, complement)

    Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene DNA repair protein Neighboring gene ncRNA Neighboring gene 19S proteasome regulatory subunit Rpn12 Neighboring gene ncRNA Neighboring gene ribokinase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003423.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Pneumocystis carinii expresses an active Rtt109 histone acetyltransferase. Kottom TJ, et al. Am J Respir Cell Mol Biol, 2011 Jun. PMID 20656950, Free PMC Article
    2. Gcn5-mediated acetylation at MBF-regulated promoters induces the G1/S transcriptional wave. González-Medina A, et al. Nucleic Acids Res, 2019 Sep 19. PMID 31260531, Free PMC Article
    3. Regulation of histone H3 lysine 56 acetylation in Schizosaccharomyces pombe. Xhemalce B, et al. J Biol Chem, 2007 May 18. PMID 17369611
    4. Acetylation of lysine 56 of histone H3 catalyzed by RTT109 and regulated by ASF1 is required for replisome integrity. Han J, et al. J Biol Chem, 2007 Sep 28. PMID 17690098
    5. H2A.Z-dependent regulation of cohesin dynamics on chromosome arms. Tapia-Alveal C, et al. Mol Cell Biol, 2014 Jun. PMID 24687850, Free PMC Article

    See all (10) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    enables histone H3K56 acetyltransferase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables histone H3K56 acetyltransferase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in DNA damage response IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in DNA damage response IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in chromatin organization IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    is_active_in chromatin IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    is_active_in nucleus HDA PubMed 
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    histone lysine acetyltransferase Rtt109

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003423.3 Reference assembly

      Range
      4213486..4214761 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001023769.3 → NP_596749.1  histone lysine acetyltransferase Rtt109 [Schizosaccharomyces pombe]

      See identical proteins and their annotated locations for NP_596749.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      Q9Y7Y5
      Conserved Domains (1) summary
      COG5087
      Location:1 → 369
      RTT109; Uncharacterized conserved protein [Function unknown]
    Nucleotide Protein
    Heading Accession and Version

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