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    sos7 protein sos7 [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 3361402, updated on 18-Sep-2024

    Summary

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    Official Symbol
    sos7
    Official Full Name
    protein sos7
    Primary source
    PomBase:SPAPB17E12.06
    Locus tag
    SPOM_SPAPB17E12.06
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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    Genomic context

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    See sos7 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    6
    Sequence:
    Chromosome: I; NC_003424.3 (1276494..1279000)

    Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene ubiquitin-protein ligase E3 Neighboring gene COP9/signalosome complex subunit Csn2 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene 60S ribosomal protein eL37 Neighboring gene tRNA-splicing endonuclease catalytic subunit Sen2 Neighboring gene uncharacterized protein Neighboring gene N-glycosylation protein Neighboring gene 2' O-ribose methyltransferase Mrm2-like protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003424.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sos7, an essential component of the conserved Schizosaccharomyces pombe Ndc80-MIND-Spc7 complex, identifies a new family of fungal kinetochore proteins. Jakopec V, et al. Mol Cell Biol, 2012 Aug. PMID 22711988, Free PMC Article
    2. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360
    3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in attachment of mitotic spindle microtubules to kinetochore IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in attachment of mitotic spindle microtubules to kinetochore IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in homologous chromosome orientation in meiotic metaphase I ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    involved_in mitotic sister chromatid segregation IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in protein localization to kinetochore IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in regulation of meiosis I spindle assembly checkpoint ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    involved_in spindle attachment to meiosis I kinetochore IC
    Inferred by Curator
    more info
    		  
    Component Evidence Code Pubs
    part_of Knl1/Spc105 complex ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    is_active_in kinetochore IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    is_active_in kinetochore IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    is_active_in kinetochore IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    NOT is_active_in mitotic spindle pole body IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    is_active_in nucleus IC
    Inferred by Curator
    more info
    		  

    General protein information

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    Preferred Names
    protein sos7

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003424.3 Reference assembly

      Range
      1276494..1279000
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001356006.2 → NP_001343031.1  protein sos7 [Schizosaccharomyces pombe]

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      U3H042
      Conserved Domains (1) summary
      cl25732
      Location:95 → 246
      SMC_N; RecF/RecN/SMC N terminal domain
    Nucleotide Protein
    Heading Accession and Version

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