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    RPL9B ribosomal 60S subunit protein L9B [ Saccharomyces cerevisiae S288C ]

    Gene ID: 855658, updated on 7-Jul-2024

    Summary

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    Gene symbol
    RPL9B
    Gene description
    ribosomal 60S subunit protein L9B
    Primary source
    FungiDB:YNL067W
    Locus tag
    YNL067W
    See related
    SGD:S000005011; AllianceGenome:SGD:S000005011; VEuPathDB:YNL067W
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Saccharomyces cerevisiae S288C (strain: S288C)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
    Summary
    A structural constituent of ribosome. Involved in cytoplasmic translation. Part of cytosolic large ribosomal subunit. Orthologous to human RPL9 (ribosomal protein L9). [provided by Alliance of Genome Resources, Apr 2022]
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    Genomic context

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    See RPL9B in Genome Data Viewer
    Location:
    chromosome: XIV
    Exon count:
    1
    Sequence:
    Chromosome: XIV; NC_001146.8 (499681..500256)

    Chromosome XIV - NC_001146.8Genomic Context describing neighboring genes Neighboring gene forkhead family transcription factor FKH2 Neighboring gene uncharacterized protein Neighboring gene putative glucosidase SUN4 Neighboring gene Aqr1p

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_001146.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Functional Analysis of the Ribosomal uL6 Protein of Saccharomyces cerevisiae. Borkiewicz L, et al. Cells, 2019 Jul 13. PMID 31337056, Free PMC Article
    2. The yeast RPL9B gene is regulated by modulation between two modes of transcription termination. Gudipati RK, et al. EMBO J, 2012 May 16. PMID 22505027, Free PMC Article
    3. Cloning and characterisation of a yeast homolog of the mammalian ribosomal protein L9. Jones DG, et al. Nucleic Acids Res, 1991 Oct 25. PMID 1945856, Free PMC Article
    4. Human ribosomal protein L9 is a Bax suppressor that promotes cell survival in yeast. Eid R, et al. FEMS Yeast Res, 2014 May. PMID 24305165
    5. The sequence of a 44 420 bp fragment located on the left arm of chromosome XIV from Saccharomyces cerevisiae. Bergez P, et al. Yeast, 1995 Aug. PMID 8533472

    See all (70) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Autoregulation of RPL9B gene expression requires a conserved potential stem-loop structure very close to the polyadenylation sites.
      Title: The yeast RPL9B gene is regulated by modulation between two modes of transcription termination.
    Submit: New GeneRIF Correction

    Pathways from PubChem

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    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by SGD

    Function Evidence Code Pubs
    enables rRNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables structural constituent of ribosome IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables structural constituent of ribosome IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in cytoplasmic translation IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in cytoplasmic translation IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    involved_in translation IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		  
    part_of cytosolic large ribosomal subunit IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    part_of cytosolic large ribosomal subunit IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    part_of ribonucleoprotein complex IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in ribosome IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    ribosomal 60S subunit protein L9B
    NP_014332.1
    • Ribosomal 60S subunit protein L9B; homologous to mammalian ribosomal protein L9 and bacterial L6; RPL9B has a paralog, RPL9A, that arose from a single-locus duplication

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001146.8 Reference assembly

      Range
      499681..500256
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001182905.1 → NP_014332.1  TPA: ribosomal 60S subunit protein L9B [Saccharomyces cerevisiae S288C]

      See identical proteins and their annotated locations for NP_014332.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      D6W1B3, P51401
      UniProtKB/TrEMBL
      A0A6A5Q3Z6, A6ZS13, A6ZU36, B3LNS5, B5VII3, B5VQX8, C7GLT7, C7GPQ6, C8Z8A3, C8ZGG3, G2WDV6, G2WM37, N1P4H5
      Conserved Domains (1) summary
      cl30086
      Location:1 → 190
      Ribosomal_L6; Ribosomal protein L6
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P51401.1

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