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    taf51 transcription initiation factor TFIID subunit taf73 [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 2539882, updated on 18-Sep-2024

    Summary

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    Official Symbol
    taf51
    Official Full Name
    transcription initiation factor TFIID subunit taf73
    Primary source
    PomBase:SPBC15D4.14
    Locus tag
    SPOM_SPBC15D4.14
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
    Also known as
    taf73
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    Genomic context

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    See taf51 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    2
    Sequence:
    Chromosome: II; NC_003423.3 (3033707..3035939)

    Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ASCC1 family protein Neighboring gene protein mug98 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene 4-phosphoerythronate phosphatase/2-phosphoglycolate phophatase, involved in detoxification of glycolytic by-products Neighboring gene splicing factor Cwf22 Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003423.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Identification of histone H4-like TAF in Schizosaccharomyces pombe as a protein that interacts with WD repeat-containing TAF. Mitsuzawa H, et al. Nucleic Acids Res, 2002 May 1. PMID 11972332, Free PMC Article
    2. Two WD repeat-containing TATA-binding protein-associated factors in fission yeast that suppress defects in the anaphase-promoting complex. Mitsuzawa H, et al. J Biol Chem, 2001 May 18. PMID 11279037
    3. Tfg3, a subunit of the general transcription factor TFIIF in Schizosaccharomyces pombe, functions under stress conditions. Kimura M, et al. Nucleic Acids Res, 2004. PMID 15616156, Free PMC Article
    4. Cryo-EM reveals promoter DNA binding and conformational flexibility of the general transcription factor TFIID. Elmlund H, et al. Structure, 2009 Nov 11. PMID 19913479
    5. RNA polymerase II initiation factor interactions and transcription start site selection. Li Y, et al. Science, 1994 Feb 11. PMID 8303296

    See all (17) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    enables RNA polymerase II general transcription initiation factor activity EXP
    Inferred from Experiment
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in transcription initiation at RNA polymerase II promoter EXP
    Inferred from Experiment
    more info
    		 PubMed 
    involved_in transcription initiation at RNA polymerase II promoter IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    part_of SAGA complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    is_active_in cytosol HDA PubMed 
    part_of transcription factor TFIID complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    part_of transcription factor TFIID complex IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    transcription initiation factor TFIID subunit taf73

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003423.3 Reference assembly

      Range
      3033707..3035939
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001022173.3 → NP_596254.1  transcription initiation factor TFIID subunit taf73 [Schizosaccharomyces pombe]

      See identical proteins and their annotated locations for NP_596254.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      O74319
      Conserved Domains (4) summary
      smart00667
      Location:14 → 38
      LisH; Lissencephaly type-1-like homology motif
      cd00200
      Location:350 → 600
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
      sd00039
      Location:354 → 401
      7WD40; WD40 repeat [structural motif]
      pfam04494
      Location:58 → 186
      TFIID_NTD2; WD40 associated region in TFIID subunit, NTD2 domain
    Nucleotide Protein
    Heading Accession and Version

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