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    rad55 DNA recombination mediator, RecA family ATPase Rad55/Rhp55 [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 2543685, updated on 18-Sep-2024

    Summary

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    Official Symbol
    rad55
    Official Full Name
    DNA recombination mediator, RecA family ATPase Rad55/Rhp55
    Primary source
    PomBase:SPAC3C7.03c
    Locus tag
    SPOM_SPAC3C7.03C
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
    Also known as
    rhp55
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    Genomic context

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    See rad55 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    2
    Sequence:
    Chromosome: I; NC_003424.3 (2066442..2067914, complement)

    Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene eisosome BAR domain-containing protein Pil2 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene transcription factor

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003424.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. [Analysis of mutations in the mat1 region of Schizosaccharomyces pombe strain with the deletion of gene rhp55+]. Vagin DA, et al. Genetika, 2006 May. PMID 16808240
    2. [The role of recombinational repair proteins in mating type switching in fission yeast cells]. Vagin DA, et al. Genetika, 2006 Apr. PMID 16756067
    3. [The dds20+ gene controls a novel Rad51Sp-dependent pathway of recombinational repair in Schizosaccharomyces pombe]. Salakhova AF, et al. Genetika, 2005 Jun. PMID 16080597
    4. Mus81-Eme1-dependent and -independent crossovers form in mitotic cells during double-strand break repair in Schizosaccharomyces pombe. Hope JC, et al. Mol Cell Biol, 2007 May. PMID 17353272, Free PMC Article
    5. Swi5 acts in meiotic DNA joint molecule formation in Schizosaccharomyces pombe. Ellermeier C, et al. Genetics, 2004 Dec. PMID 15466419, Free PMC Article

    See all (43) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. rqh1 plays a role late in HR following replication arrest and Rhp55/57 has a postsynaptic function
      Title: A postsynaptic role for Rhp55/57 that is responsible for cell death in Deltarqh1 mutants following replication arrest in Schizosaccharomyces pombe.
    2. mutation in rhp55 gene may lead to the aberrant gene conversion
      Title: [Analysis of mutations in the mat1 region of Schizosaccharomyces pombe strain with the deletion of gene rhp55+].
    3. genes rhp51+ and rhp55+ are involved not only in the repair of induced DNA double-strand breaks, but also in the mechanism of mating type switching in fission yeast.
      Title: [The role of recombinational repair proteins in mating type switching in fission yeast cells].
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    enables ATP binding ISM
    Inferred from Sequence Model
    more info
    		  
    enables ATP hydrolysis activity NAS
    Non-traceable Author Statement
    more info
    		  
    enables ATP-dependent DNA damage sensor activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    contributes_to crossover junction DNA endonuclease activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    contributes_to four-way junction DNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in DNA damage response IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in DNA strand invasion TAS
    Traceable Author Statement
    more info
    		 PubMed 
    involved_in double-strand break repair via homologous recombination IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in meiotic DNA recombinase assembly IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in meiotic joint molecule formation TAS
    Traceable Author Statement
    more info
    		 PubMed 
    involved_in reciprocal meiotic recombination IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in reciprocal meiotic recombination IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    involved_in reciprocal meiotic recombination IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of Rad51B-Rad51C-Rad51D-XRCC2 complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    part_of Rad51C-XRCC3 complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    is_active_in cytosol HDA PubMed 
    is_active_in nucleus HDA PubMed 
    is_active_in replication fork IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    is_active_in site of double-strand break IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    DNA recombination mediator, RecA family ATPase Rad55/Rhp55

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003424.3 Reference assembly

      Range
      2066442..2067914 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001019035.3 → NP_593604.1  DNA recombination mediator, RecA family ATPase Rad55/Rhp55 [Schizosaccharomyces pombe]

      See identical proteins and their annotated locations for NP_593604.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      O14129
      Conserved Domains (2) summary
      COG0468
      Location:1 → 295
      RecA; RecA/RadA recombinase [Replication, recombination and repair]
      cl21455
      Location:29 → 327
      P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
    Nucleotide Protein
    Heading Accession and Version

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